Table 2.
MAF | 0.01 | 0.005 | 0.01 | 0.005 | 0.01 | 0.005 | 0.01 | 0.005 |
---|---|---|---|---|---|---|---|---|
Number of cases/controls | 500/500 | 500/500 | 750/750 | 750/750 | 500/500 | 500/500 | 750/750 | 750/750 |
Number of variants | 30 | 30 | 30 | 30 | 30 | 30 | 30 | 30 |
Number of risk variants/number of protective variants | 10/0 | 10/0 | 10/0 | 10/0 | 7/3 | 7/3 | 7/3 | 7/3 |
CMC | 0.222 | 0.148 | 0.280 | 0.176 | 0.094 | 0.054 | 0.108 | 0.070 |
Price | 0.232 | 0.152 | 0.274 | 0.160 | 0.132 | 0.102 | 0.160 | 0.140 |
MB | 0.248 | 0.176 | 0.330 | 0.194 | 0.104 | 0.066 | 0.128 | 0.100 |
RB | 0.372 | 0.250 | 0.446 | 0.288 | 0.166 | 0.114 | 0.226 | 0.168 |
SKAT | 0.254 | 0.176 | 0.346 | 0.176 | 0.128 | 0.074 | 0.162 | 0.114 |
C-Alpha | 0.172 | 0.112 | 0.244 | 0.134 | 0.130 | 0.104 | 0.210 | 0.126 |
DBM | 0.332 | 0.218 | 0.342 | 0.238 | 0.132 | 0.122 | 0.152 | 0.162 |
Tested at α = 0.05, 500 replicates.