Table 1. Genotype characteristics of each single nucleotide polymorphism.
Gene | SNP | Function | Allelea | Case (MAF) | Control (MAF) | OR (95% CI) | P-value | HWEb |
IL21 | rs907715 | Intron | A/G | 0.420 | 0.463 | 0.84 (0.74–0.96) | 0.01 | 0.37 |
IL21 | rs2221903 | Intron | G/A | 0.115 | 0.098 | 1.19 (0.96–1.47) | 0.11 | 0.18 |
IRF5 | rs4728142 | Flanking 5' UTR | A/G | 0.164 | 0.119 | 1.45 (1.20–1.75) | 9.79×10−5 | 0.92 |
IKZF1 | rs4917014 | Flanking 5' UTR | G/T | 0.267 | 0.331 | 0.74 (0.64–0.85) | 2.56×10−5 | 0.39 |
ETS1 | rs6590330 | Flanking 3' UTR | A/G | 0.407 | 0.345 | 1.30 (1.14–1.49) | 1.15×10−4 | 0.26 |
MiR146a | rs57095329 | Promoter | G/A | 0.214 | 0.200 | 1.09 (0.93–1.28) | 0.29 | 0.62 |
MAF, minor allele frequency; 95% CI, 95% confidence intervals; HWE, Hardy-Weinberg Equilibrium.
nor allele/major allele;
P-value for HWE.