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. Author manuscript; available in PMC: 2013 Oct 1.
Published in final edited form as: Int J Parasitol. 2012 Sep 27;42(11):969–974. doi: 10.1016/j.ijpara.2012.09.003

Table 1.

List of primers used in this study.

Name Nucleotide Sequence Description
p1 5′ -ccGCATGCTACACCATTGTTAGTTGTATACAAGG Forward primer of pbcrt 3′ coding sequence; SphI site underlined
p2 5′ -ttGCGGCCGCTTATGCCCTTGATGTTTCTATAGAAG Reverse primer of pbcrt 3′ coding sequence; NotI site underlined
p3 5′-ccAAGCTTTTGATACAACATTTTTATTTCTTAAATGATTTTTG Forward primer of pbcrt 3′UTR;HindIII site underlined
p4 5′ -ccGCATGCCTCTCTATACATAGGCAAATAAGG Reverse primer of pbcrt 3′UTR; SphI site underlined
p5 5′-CATATGTGATAATTTACTTGCTTGC Forward primer of pbcrt upstream coding sequence
p6 5′-CTGGTGCTTTGAGGGGTGAGC Reverse primer from hdhfr selectable marker cassette
p7 5′-CAGGAAACAGCTATGAC Reverse primer specific to the plasmid backbone
p8 5′-GTTGGTTCGCTAAACTGCATC Forward primer for hdhfr qPCR
p9 5′-CTGTTTACCTTCTACTGAAGAGG Reverse primer for hdhfr qPCR
p10 5′-TGCAGCAGATAATCAAACTC Forward primer for hsp70 qPCR
p11 5′-ACTTCAATTTGTGGAACACC Reverse primer for hsp70 qPCR
p12 5′-CCTTATCTCATTATTAGATGCTTCTAC Forward primer for pbcrt RT-PCR
p13 5′-CCAATATTCTTGGTTTTCTTACAGC Reverse primer for pbcrt RT-PCR
p14 5′-TATGGGTCCAAGATATTGTAGTAATAA Forward primer for Plasmodium berghei ama1 RT-PCR
p15 5′-GAATTAGCTTTACCATAAATATCTGC Reverse primer for P. berghei ama1 RT-PCR
QT 5′-CCAGTGAGCAGAGTGACGAGGACTCGAGCTCAAGC(T)17 Primer to generate cDNA for 3′RACE
QO 5′-CCAGTGAGCAGAGTGACG Outer primer for 3′RACE
QI 5′-GAGGACTCGAGCTCAAGC Inner primer for 3′RACE
SP6 5′-ATTTAGGTGACACTATAG pGEM vector-specific primer to sequence 3′RACE products
M13F 5′-GTAAAACGACGGCCAGT pGEM vector-specific primer to sequence 3′RACE products

amal, apical membrane antigen 1; hdhfr human dihydrofolate reductase selectable marker; hsp70, heat shock protein 70; Pbcrt, Plasmodium berghei chloroquine resistance transporter; qPCR, quantitative PCR; RACE, random amplification of cDNA ends; RT-PCR, reverse transcription PCR; UTR, untranslated region.