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. 2012 Oct 11;12:465. doi: 10.1186/1471-2407-12-465

Table 1.

Primer sequences with corresponding annealing temperatures, efficiencies, and product length in basepairs (bp) used for realtime PCR

Gene Primer sequences (sense/antisense) Efficiency Annealing temperature (°C) Product length (bp)
GAPDH
5′;-TGGTATCGTGGAAGGACTCA-3′;
1.93
67
132
5′;-CCAGTAGAGGCAGGGATGAT-3′;
DEFA1/3
5′;-ATGAGGACCCTCGCCATCCTTGCT-3′;
2.17
69
285
5′;-TCAGCAGCAGAATGCCCAGCGTCTTCCC-3′;
DEFA4
5′;-GTCTGCTCTTGCAGATTAGTATTCTG-3′;
1.98
69
105
  5′;-TTAATCGACACGCGTGCAGCAGTAT-3′;      

PCR efficiencies for every set of primers were determined with dilution series of primer specific cloned PCR-products at the corresponding annealing temperature. Efficiency stands for the performance to amplify a cDNA template. Efficiency values of 2.0 means an amplification of 100%.