Table II. Proteolytic peptides of Cab−SG−MIH identified by bottom-up de novo sequencing.
Obsd. m/z | Charge state | Calcd. MW | Sequencea | Proteolytic peptide | Mascot ion scoreb | Protease |
---|---|---|---|---|---|---|
828.49 | 2 | 1654.82 | RVINDDCPNLIGNR | MIH [1–14] | 65 | Trypsin |
750.40 | 2 | 1498.71 | VINDDCPNLIGNR | MIH [2–14] | 70 | Trypsin |
1010.11 | 2 | 2017.99 | VINDDCPNLIGNRDLYK | MIH [2–18] | 76 | Trypsin |
928.50 | 2 | 1854.84 | KVEWICEDCSNIFR | MIH [19–32] | 90 | Trypsin |
864.48 | 2 | 1726.74 | VEWICEDCSNIFR | MIH [20–32] | 53 | Trypsin |
512.30 | 2 | 1022.46 | NTGMATLCR | MIH [33–41] | 50 | Trypsin |
1200.16 | 2 | 2398.05 | KNCFFNEDFLWCVYATER | MIH [42–59] | 79 | Trypsin |
1136.11 | 2 | 2269.96 | NCFFNEDFLWCVYATER | MIH [43–59] | 95 | Trypsin |
590.96 | 2 | 1769.85 | RVINDDCPNLIGNRD | MIH [1–15] | 49 | Glu-C |
a Fixed carbamidomethyl is on cysteine.
b Matching to homologous sequence.