. Author manuscript; available in PMC: 2013 Dec 20.

Published in final edited form as: Virology. 2012 Sep 12;434(2):242–250. doi: 10.1016/j.virol.2012.08.031

Table 3. Oligonucleotides used in this study.

Plasmid	Oligonucleotide	Sequence (5′-3′)^*
pPD1	SMT34	GACTCATATGGAACAAACACAAAAATTAAAAT
pPD1	SMT35	GACTGGATCCTTATTAAACTTCTCCTGGAACT

pPD8	PKD-9	GAGGATCCGGTCGAAAACAAGGACTTTAGCGATAGAG
	PKD-10	ATGCCTCCGTTAATTTTTAATAATTCTATTTTCTTCCATGAGATATACCTCCATTTATAGTCTGTC
	PKD-11	ATGGAAGAAAATAGAATTATTAAAAATTAACGGAGGCATTTAAATGGAACAAAC
	PKD-12	GAGGATCCCAATGATTTCGGGCATGTTACCACTCC

pPD18	pKD57	AACTGCAGAACGGAGGCATTTAAATGGAAC
pPD18	pKD58	AACTCGAGAAGTCAGGCGCGCCAATTGTTTATTAAACTTCTCCTGGAACT

pPD20	PKD-78	CACAGGATCCATGGAACAAACACAAAAATTAAAATTAAATTTGC
pPD20	PKD-58	AACTCGAGAAGTCAGGCGCGCCAATTGTTTATTAAACTTCTCCTGGAACT

pPD21	PKD-79	CACAGGATCCATGGAAGAAAATAAACTTAAGTTTAATTTGCAA
pPD21	PKD-58	AACTCGAGAAGTCAGGCGCGCCAATTGTTTATTAAACTTCTCCTGGAACT

pPD22	PKD-66	TTTTGGATCCATGTTAAAAGTAAACGAATTTGAAACAGATACA
pPD22	PKD-67	AAAACTGCAGTAATTGTTTATTAAACTTCTCCTGGAACTG

pPD41	PKD-104	CACAGGATCCATGGCAGACCAATCAGATGATCCG
pPD41	PKD-58	AACTCGAGAAGTCAGGCGCGCCAATTGTTTATTAAACTTCTCCTGGAACT

pPD44	PKD-86	GGCAAAGGCGCGCCAAGAAAGGGTAATTAAATGGAAACAAAATACGA
pPD44	PKD-87	GGCAACTCGAGTTGCTATTTAATAATCCTGTTTTGCTTAGCTAAATTT

pPD45	PKD-88	GGCAAAGGCGCGCCAAGGGGATAAAAATGAAAACTGAATCGTAC
pPD45	PKD-89	GGCAACTCGAGTTAACGTTTTAAAAACAACTTGTTATTGTGTTCG

pPD46, pPD51	PKD-88	GGCAAAGGCGCGCCAAGGGGATAAAAATGAAAACTGAATCGTAC
pPD46, pPD51	PKD-87	GGCAACTCGAGTTGCTATTTAATAATCCTGTTTTGCTTAGCTAAATTT

Restriction sites are underlined