Table 3. Number of enriched terms and pathways in all lists detected by the enrichment tools.
Tool | 130 gene list | 365 gene list | GSE13195 core list | GSE24202 core list | ||||||||
BP | MF | KEGG | BP | MF | KEGG | BP | MF | KEGG | BP | MF | KEGG | |
ConsensusPathDB | 305 | 31 | 9 | 558 | 61 | 31 | 62 | 10 | 6 | 247 | 34 | 8 |
FatiGO | 178 | 28 | 9 | 452 | 72 | 36 | 0 | 0 | 2 | 172 | 28 | 10 |
GeneCodis | 34 | 16 | 8 | 155 | 45 | 46 | 59 | 17 | 4 | 240 | 48 | 7 |
ToppFun | 241 | 21 | 1 | 610 | 45 | 5 | 0 | 0 | 1 | 127 | 14 | 0 |
WebGestalt | 40 | 28 | 6 | 40 | 40 | 37 | 5 | 4 | 4 | 40 | 30 | 8 |