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. 2012 Dec 10;7(12):e51136. doi: 10.1371/journal.pone.0051136

Table 3. Number of enriched terms and pathways in all lists detected by the enrichment tools.

Tool 130 gene list 365 gene list GSE13195 core list GSE24202 core list
BP MF KEGG BP MF KEGG BP MF KEGG BP MF KEGG
ConsensusPathDB 305 31 9 558 61 31 62 10 6 247 34 8
FatiGO 178 28 9 452 72 36 0 0 2 172 28 10
GeneCodis 34 16 8 155 45 46 59 17 4 240 48 7
ToppFun 241 21 1 610 45 5 0 0 1 127 14 0
WebGestalt 40 28 6 40 40 37 5 4 4 40 30 8

The numbers of enriched terms and pathways found by the particular enrichment tools are displayed. BP, GO biological process; MF, GO molecular function; KEGG, KEGG pathway. GSE13195 core list of Choi et al., GSE24202 core list of Taube et al. [13], [39].