Table 3.
miRa_name | Sequenced sequence | raw_Al-free | raw_Al-treated | norm_ Al-free | norm_ Al-treated | Log2(Al-treated/Al-free) |
---|---|---|---|---|---|---|
PCc-28-3p |
CATTTGGGCACCTATTTTGACTC |
24 |
2 |
25.36 |
1.89 |
−3.74 |
PNb-miR164 |
TGGAGAAGCAGGGCACGTGCA |
95 |
12 |
100.39 |
11.36 |
−3.14 |
PN-miR2111 |
CTAGTCCTTGGGATGCAGATTACG |
57 |
10 |
60.23 |
9.46 |
−2.67 |
PC-1-5p |
TGGCCTGTGATGCATCAATTTGTC |
49 |
10 |
51.78 |
9.46 |
−2.45 |
PC-4-5p |
GTCGTTGTAGTATAGTGGTAAGT |
26 |
8 |
27.47 |
7.57 |
−1.86 |
PN-miR5044 |
GTAGTGGATGCCTAGAGGTCC |
25 |
8 |
26.42 |
7.57 |
−1.80 |
PN-miR156b,c,d |
TGACAGAAGAGAGTGAGCAC |
369 |
137 |
389.92 |
129.65 |
−1.59 |
gso-mir2109-p3 |
GGAGGCGTAGATACTCACACC |
2655 |
1201 |
2805.55 |
1136.55 |
−1.30 |
PC-46-5p |
CTATATGATGAAGATA |
52 |
26 |
54.95 |
24.60 |
−1.16 |
PN-miR1507c |
CCTCATTCCAAACATCATCTAA |
377 |
194 |
398.38 |
183.59 |
−1.12 |
gso-miR2218 |
TTGCCGATTCCACCCATTCCTA |
7282 |
19061 |
7694.91 |
18038.15 |
1.23 |
PN-miR169c |
AAGCCAAGGATGACTTGCCGA |
17 |
47 |
17.96 |
44.48 |
1.31 |
PN-miR390b |
AAGCTCAGGAGGGATAGCACC |
13 |
36 |
13.74 |
34.07 |
1.31 |
PN-miR862a, b |
GCTGGATGTCTTTGAAGGAAT |
113 |
355 |
119.41 |
335.95 |
1.49 |
PC-39-5p |
TAGATTTTAAAGTTGCGGATCA |
10 |
32 |
10.57 |
30.28 |
1.52 |
gso-mir1509a-p3 |
ACCGTGTTTCCTTGGTTAACG |
9 |
34 |
9.51 |
32.18 |
1.76 |
PC-25-3p |
CTACATAAGGCACGAGATCATC |
7 |
29 |
7.40 |
27.44 |
1.89 |
gso-mir1510a-p5 |
AGGGATAGGTAAAACAATGAC |
6 |
25 |
6.34 |
23.66 |
1.90 |
PN-miR4387e-p5 |
TCACGCCTAATCACTGACGCA |
11 |
49 |
11.62 |
46.37 |
2.00 |
PN-miR1514a |
TTCATTTTTAAAATAGGCATTGGG |
11 |
51 |
11.62 |
48.26 |
2.05 |
PN-mir4415-p3 |
TTGATTCTCATCACAACATGG |
41 |
243 |
43.32 |
229.96 |
2.41 |
PC-33-3p |
GGAGAACAAAGAAGCAGCTAAATTC |
4 |
29 |
4.23 |
27.44 |
2.70 |
PN-miR4369 |
GGATCAAGCTGATCCGGAAGTGGA |
3 |
23 |
3.17 |
21.77 |
2.78 |
PN-miR396a-1 |
TTCCACAGCTTTCTTGAACTG |
81 |
676 |
85.59 |
639.72 |
2.90 |
PN-miR403a, b |
TTAGATTCACGCACAAACTTG |
5 |
44 |
5.28 |
41.64 |
2.98 |
PN-miR1509b | TTAATCAAGGAAATCACGGTTG | 190 | 2232 | 200.77 | 2112.23 | 3.40 |
a, miR_name is the name that was assigned to the detected miRNA sequences.
b, PN means ‘potential novel’.
c, PC means 'predicted candidate’.