Table 1.
Comparison of the amino acid sequence ofArthrobactersp. 22c L-arabinose isomerase with amino acid sequences of L-arabinose isomerases from various microorganisms
| Organism | GenBank Accession No. | Identity (%) | Similarity (%) |
|---|---|---|---|
|
Arthrobacter sp. FB24 |
ABK01625 |
71.1 |
89.1 |
|
Arthrobacter chlorophenolicus A6 |
ACL38380 |
69.7 |
88.2 |
|
Arthrobacter aurescens TC1 |
ABM06985 |
69.5 |
88.6 |
|
Acidothermus cellulolytics ATCC 43068 |
ACZ67491 |
59.3 |
83.4 |
|
Bacillus stearothermophilus US100 |
CAI29261 |
54.6 |
81.3 |
|
Geobacillus stearothermophilus |
AAD45718 |
54.6 |
81.3 |
|
Anoxybacillus flavithermus |
AEE98871 |
54.6 |
81.1 |
|
Alicyclobacillus acidocaldarius |
AAY68209 |
54.4 |
81.1 |
|
Thermus sp. IM6501 |
AAO72082 |
54.2 |
80.7 |
|
Geobacillus thermodenitrificans |
AAQ72737 |
54.0 |
80.9 |
|
Bacillus stearothermophilus IAM 11001 |
ABY84698 |
53.8 |
80.7 |
|
Thermotoga neapolitana |
AAK18729 |
52.8 |
78.7 |
|
Thermotoga maritima |
AAD35365 |
52.0 |
77.6 |
|
Bacillus halodurans |
BAB05592 |
50.3 |
79.3 |
|
Escherichia coli str. K-12 substr. W3110 |
BAB96631 |
50.0 |
79.1 |
|
Lactobacillus sakei 23 K |
CAI56163 |
48.5 |
75.0 |
|
Lactobacillus plantarum NC8 |
CCC80517 |
48.3 |
74.4 |
|
Lactobacillus fermentum CGMCC2921 |
ADJ94948 |
43.7 |
71.9 |
| Thermoanaerobacter mathranii | CAE46769 | 25.1 | 59.8 |
A homology search was performed using version 3 of the FASTA programme at the EBI (European Bioinformatics Institute).