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. 2012 Dec 14;7(12):e52069. doi: 10.1371/journal.pone.0052069

Table 3. Sequences associated with specific functions and taxa within the sulfur cycle using KEGG pathways.

Number of reads assigned E.C Number Orthology KEGG Enzyme name Gene Organism Class E-value e
8 2.3.1.30 K00640 serine O-acetyltransferase cysE Gemmata obscuriglobus Planctomycetacia 6 e–36
Bryantella formatexigens Clostridia 1 e–32
37 2.7.7.4 K00956 sulfate adenylyltransferase subunit 1 cysN Laribacter hongkongensis Betaproteobacteria 2 e–15
Stigmatella aurantiaca Deltaproteobacteria 6 e–11
Bacterium Ellin514 Verrucomicrobiae 3 e–11
K00957 sulfate adenylyltransferase subunit 2 cysD Clostridium cellulovorans Clostridia 2 e–24
Uncultured Archeon Archaea 2 e–18
Rhodomicrobium vannielii Alphaproteobacteria 4 e–10
Opitutaceae bacterium Opitutae 6 e–20
Marinobacter aquaeolei Gammaproteobacteria 2 e–19
Clostridium cellulovorans Clostridia 7 e–16
K00958 sulfate adenylyltransferase cysDN Leptospirillum ferrodiazotrophum Nitrosospira 1 e–75
Micromonas pusilla a Prasinophyceae 2 e–21
Planctomyces maris Planctomycetacia 4 e–29
Thialkalivibrio sp. Gammaproteobacteria 5 e–26
Rhodothermus marinus Sphingobacteria 5 e–23
Silicibacter lacuscaerulensis Alphaproteobacteria 2 e–17
Syntrophobacter fumaroxidans Deltaproteobacteria 2 e–18
Thiobacilllus denitrificans Betaproteobacteria 6 e–15
K00955 bifunctional enzyme CysN/CysC cysNC Acidiphilium cryptum Alphaproteobacteria 7 e–72
Xenorhabdus nematophila Gammaproteobacteria 6 e–41
8 1.8.3.1 K00387 sulfite oxidase * X Phaeodactylum tricornutum b Bacillariophyceae 1 e–14
Nematostella vectensis c Anthozoa 8 e–15
9 1.8.99.2 K00395 adenylylsulfate reductase, subunit B aprB Thiobacillus aquaesulis Betaproteobacteria 3 e–32
Thermodesulfovibrio yellowstonii Nitrosospira 5 e–45
K00394 adenylylsulfate reductase, subunit A aprA Thiobacilllus denitrificans Betaproteobacteria 9 e–24
Desulfirivibrio alkaliphilus Deltaproteobacteria 3 e–14
Thiobacilllus denitrificans Betaproteobacteria 2 e–22
13 2.7.1.25 K00955 bifunctional enzyme CysN/CysC cysNC Acidiphilium cryptum Alphaproteobacteria 7 e–72
Xenorhabdus nematophila Gammaproteobacteria 6 e–41
K00860 adenylylsulfate kinase cysC Geobacter sp. Deltaproteobacteria 7 e–15
Burkholderia sp. Betaproteobacteria 3 e–15
Chloroflexus sp. Chloroflexi 8 e–22
Chlamydomonas reinhardtii a Chlorophyceae 1 e–24
4 e–33
1 e–32
23 2.5.1.47 K12339 cysteine synthase B cysM Thioalkalivibrio sp. Gammaproteobacteria 5 e–16
Streptomyces clavuligerus Actinobacteria 4 e–24
K01738 cysteine synthase A cysK Desulfirivibrio alkaliphilus Deltaproteobacteria 3 e–12
Chlamydomonas reinhardtii a Chlorophyceae 2 e–13
Thalassiosira pseudonana b Coscinodiscophyceae 5 e–16
Gemmata obscuriglobus Planctomycetacia 3 e–12
Chlamydomonas reinhardtii a Cholorophyceae 5 e–22
Polytomella parva a Cholorophyceae 1 e–15
Symbiobacterium thermophilum Clostridia 2 e–15
2 e–15
4 1.8.4.8 K00390 phosphoadenosine phosphosulfate reductase cysH Acidobacterium capsulatum Acidobacteria 4 e–22
10 1.8.1.2 K00381 sulfite reductase (NADPH) hemoprotein beta-component cysI Haliangium achraceum Deltaproteobacteria 2 e–24
Azoarcus sp. Betaproteobacteria 5 e–30
Citomicrobium bathyomarinum Alphaproteobacteria 1 e–32
K00380 sulfite reductase (NADPH) flavoprotein alpha-component cysJ Chlamydomonas reinhardtii a Chlorophyceae 1 e–17
3 1.8.7.1 K00392 sulfite reductase (ferredoxin) sir Physcomitrella patens d Embryophyta 1 e–13
Micromonas pusilla a Prasinophyceae 2 e–12
*

sulfur oxidation; a micro-algae; b diatom; c sea anemone; d moss; e (cut-off E-value 1e -10).