Table 3. Top 10 RMSD values for the GroEL cis ring after the refinement stage.
Rank | Overall RMSD | ligand RMSD |
1 | 2.5 | 1.0 |
2 | 6.2 | 7.5 |
3 | 6.6 | 4.8 |
4 | 7.2 | 11.1 |
5 | 6.2 | 9.8 |
6 | 8.1 | 12.5 |
7 | 7.1 | 11.0 |
8 | 7.1 | 1.0 |
9 | 7.2 | 7.5 |
10 | 7.8 | 4.8 |
RMSD and ligand RMSD values of the top 10 models for the GroEL cis ring (in Å), compared to the reference structure; models were fitted (energy-minimized) using a 40 Å simulated density map, ranked by gradient matching using a 20 Å simulated density map, and refined using the ATTRACT force field.