Table 4. Top 10 RMSD values for GroES-GroEL with simulated data, after the scoring stage.
Overall RMSD | ||||
GroEL | GroEL | |||
rank | all | GroES | cis | trans |
1 | 10.8 | 33.5 | 5.5 | 3.8 |
2 | 9.5 | 26.4 | 5.0 | 6.5 |
3 | 8.4 | 15.2 | 7.6 | 7.2 |
4 | 10.2 | 18.5 | 6.0 | 11.2 |
5 | 11.6 | 23.7 | 12.2 | 6.5 |
6 | 9.6 | 21.8 | 6.9 | 7.8 |
7 | 12.3 | 23.9 | 8.1 | 12.5 |
8 | 11.8 | 24.3 | 12.1 | 6.7 |
9 | 11.3 | 27.1 | 8.3 | 8.5 |
10 | 13.2 | 30.7 | 9.3 | 8.4 |
RMSD values of the top 10 models for the full GroES-GroEL complex (in Å), compared to the reference structure; models were fitted (energy-minimized) using a 40 Å simulated density map and ranked by gradient matching using a 20 Å simulated density map.