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. Author manuscript; available in PMC: 2012 Dec 15.
Published in final edited form as: Biochemistry. 2011 Jul 11;50(33):7251–7258. doi: 10.1021/bi200805j

Table 1.

Melting Temperatures and van’1t Hoff Thermodynamic Parameters for RNA and DNA G-Quadruplex-Forming Librariesa and Naturally Occurring RNA G-Quadruplex-Forming Sequencesb

Tm(VH)/Tmc (°C) ΔHvh (kJ mol−1) ΔSvh (kJ mol−1 K−1) ΔGvh(37 °C) (kJ mol−1)
L111 86/86 −249 ± 16 −0.692 ± 0.045 −33.8 ± 1.8
L112 78/78 −237 ± 10 −0.674 ± 0.030 −27.6 ± 1.2
L121 76/76 −239 ± 15 −0.685 ± 0.042 −26.7 ± 1.4
L211 77/77 −247 ± 4 −0.703 ± 0.013 −28.3 ± 0.1
L113 74/74 −241 ± 17 −0.701 ± 0.067 −25.7 ± 1.4
L131 73/73 −279 ± 16 −0.798 ± 0.064 −25.7 ± 1.6
L311 75/75 −238 ± 2 −0.684 ± 0.007 −26.0 ± 0.1
L122 72/72 −266 ± 17 −0.768 ± 0.075 −26.5 ± 1.0
L212 72/72 −245 ± 1 −0.711 ± 0.002 −24.6 ± 0.8
L221 70/71 −251 ± 1 −0.730 ± 0.006 −24.4 ± 0.3
L222 67/67 −236 ± 19 −0.693 ± 0.056 −20.8 ± 1.6
L133 63/63 −242 ± 5 −0.721 ± 0.014 −18.4 ± 0.2
L313 65/65 −233 ± 4 −0.687 ± 0.012 −19.2 ± 0.6
L331 63/64 −243 ± 0 −0.722 ± 0.000 −19.1 ± 0.1
L223 63/63 −241 ± 5 −0.717 ± 0.017 −18.6 ± 0.4
L232 61/62 −238 ± 14 −0.712 ± 0.041 −17.4 ± 1.2
L322 59/59 −224 ± 4 −0.673 ± 0.012 −14.9 ± 0.2
L233 59/59 −231 ± 3 −0.693 ± 0.008 −15.4 ± 0.5
L323 59/59 −218 ± 9 −0.657 ± 0.027 −14.2 ± 0.3
L332 57/58 −220 ± 6 −0.665 ± 0.016 −13.5 ± 0.6
L333 55/55 −232 ± 7 −0.707 ± 0.021 −12.9 ± 0.6
L444 49/50 −159 ± 0 −0.493 ± 0.001 −6.1 ± 0.1
L555 46/47 −165 ± 4 −0.518 ± 0.013 −4.6 ± 0.1
dL111 77/78 −190 ± 9 −0.543 ± 0.027 −21.9 ± 0.6
dL222 41/41 −116 ± 3 −0.368 ± 0.008 −1.4 ± 0.1
dL333 38/38 −132 ± 1 −0.425 ± 0.004 −0.3 ± 0.0
TRF2 77/78 −255 ± 6 −0.728 ± 0.016 −29.4 ± 0.9
MT3 71/71 −247 ± 6 −0.719 ± 0.016 −24.1 ± 1.0
NRAS 69/68 −244 ± 4 −0.713 ± 0.012 −22.7 ± 0.5
TERRA 57/58 −265 ± 5 −0.799 ± 0.016 −16.3 ± 0.3
a

For the libraries, these measurements represent apparent values derived from melting curves of the mixtures.

b

All errors are given as the standard deviation. Tm values are accurate to ±1 °C.

c

Tm(VH) values are melting temperatures determined from van’t Hoff analysis, whereas Tm values are determined as the point at which the folded fraction equals one-half.