Table 5.

Summary of nucleotide diversity and divergence within and between species.

Taxa	S	πT	πsil	πsyn	πnonsyn	πnonsyn/πsyn	Nh	Hd	Hd (s.d.)
C. reticulata	8·926	0·005	0·008	0·010	0·003	0·411	4·407	0·593	0·096
C. maxima	3·926	0·004	0·005	0·004	0·001	0·191	3·222	0·521	0·116
C. medica	2·815	0·003	0·004	0·004	0·001	0·256	2·037	0·296	0·068
Fortunella	8·481	0·006	0·009	0·008	0·003	0·285	5·185	0·683	0·097
Papeda	9·630	0·009	0·015	0·014	0·003	0·292	4·519	0·871	0·126
Microcitrus	5·889	0·006	0·009	0·011	0·003	0·184	2·926	0·760	0·198
Eremocitrus	3·407	0·006	0·009	0·013	0·004	0·154	1·778	0·772	0·380
Poncirus	2·407	0·003	0·005	0·003	0·000	0·088	2·148	0·469	0·099
Main taxa	39·667	0·013	0·021	0·020	0·006	0·555	23·074	0·926	0·016
Whole population	40·926	0·012	0·021	0·020	0·005	0·495	28·333	0·901	0·015
Max	9·630	0·009	0·015	0·014	0·004	0·411	5·185	0·871	0·380
Min	2·407	0·003	0·004	0·003	0·000	0·088	1·778	0·296	0·068

S, segregating sites; π_T, nucleotide diversity total; π_sil, nucleotide diversity silent sites; π_syn, nucleotide diversity synonymous sites; π_nonsyn/syn, ratio nucleotide diversity non-synonymous/synonymous sites; N_h, number of haplotypes; H_d, haplotype diversity. Max and min: maximum and minimum values within the basic taxa.