Table 7. Regulation of cellular assembly & organization and cell signaling-associated genes in the core and periinfarct after permanent focal cerebral ischemia.

Symbol	Gene Name	24 h		3 d
		Core	Periinfarct	Core	Periinfarct
Cellular Assembly & Organization
RHOA	Ras homolog gene family, member A	–	–	–	–
SMC4	Structural maintenance of chromosomes 4	–	–	3.83 (<10−9)	2.02 (<10−4)
NUF2	Kinetochore protein Nuf2	–	–	19.7 (<10−9)	7.36 (<10−5)
ECT2	ECT2 gene	3.16 (<0.05)	–	32.0 (<10−10)	10.6 (<10−5)
FEZ1	Fasciculation and elongation protein zeta-1	–	–	0.45 (<0.01)	–
TNR	Tenascin-R	–	–	0.47 (<10−7)	–
Cell Signaling
RFTN1	Raftlin, lipid raft linker 1	2.12 (<0.01)	2.45 (<10−4)	7.06 (<10−9)	2.29 (<0.01)
NDN	Necdin	–	0.40 (<10−5)	–	–
CCL5	Chemokine (C-C motif) ligand 5	–	2.39 (<0.05)	2.36 (<0.01)	–
CXCL1	Chemokine (C-X-C motif) ligand 1	27.1 (<0.01)	238 (<10−6)	82.7 (<10−5)	27.7 (<0.01)
CXCL10	Chemokine (C-X-C motif) ligand 10	7.36 (<10−4)	9.38 (<10−4)	6.27 (<10−4)	9.32 (<10−4)
CXCL11	Chemokine (C-X-C motif) ligand 11	11.5 (<10−4)	22.8 (<10−5)	25.3 (<10−6)	12.8 (<10−4)
CXCL12 (T1)	Chemokine (C-X-C motif) ligand 12 (transcript 1)	–	–	–	–
CXCL12 (T3)	Chemokine (C-X-C motif) ligand 12 (transcript 3)	0.28 (<10−9)	0.36 (<10−7)	–	–
CXCL13	Chemokine (C-X-C motif) ligand 13	4.75 (<0.05)	3.48 (<0.05)	10.9 (<10−5)	5.89 (<0.05)
CCL2	Chemokine (C-C motif) ligand 2	576 (<10−8)	560 (<10−8)	388 (<10−8)	69.1 (<10−5)
CCL4	Chemokine (C-C motif) ligand 4	15.8 (<10−7)	14.0 (<10−7)	7.94 (<10−6)	2.88 (<0.05)
CCL5	Chemokine (C-C motif) ligand 5	–	2.39 (<0.05)	2.36 (<0.01)	–
CCL20	Chemokine (C-C motif) ligand 20	46.2 (<10−5)	90,5 (<10−6)	4.86 (<0.05)	–
MyD88	Myeloid differentiation primary response gene 88	2.27 (<0.01)	2.00 (<0.05)	2.71 (<10−4)	–
ANGPT2	Angiopoietin-2	3.41 (<0.05)	2.92 (<0.05)	2.36 (<0.05)	–
CALCB	Calcitonin-related polypeptide beta	18.4 (<10−8)	12.2 (<10−6)	61.8(<10−11)	11.8 (<10−6)

Expression is given by fold change in value compared with healthy controls. Adjusted p-value (AdjP) is given in parenthesis.