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The number of common peaks identified by the three ChIP-seq analytical tools for Stat1 experimental data
| Prediction | Predictions within 200 bp | |||
|---|---|---|---|---|
| Spp | PeakSeq | CisGenome | Known Stat1 binding sites (stimulated) | |
| Spp | - | 2633 (97%) | 1640 (60%) | 17/28 (61%) |
| PeakSeq | 2579 (46%) | - | 1671 (30%) | 19/28 (68%) |
| CisGenome | 1611 (96%) | 1677 (100%) | - | 12/28 (43%) |
