Table 1.
Chr | Start | End | Size (kb) | P0 Events | deCODE Male (cM)/p-valuea | HapMap Sex-ave (cM)/p-valuea | P0 Activity by Allelic PCR (cM) | P0 Activity by 2-loci Typing (cM) |
---|---|---|---|---|---|---|---|---|
2-Mb sliding window scanning (66 comparisons) | ||||||||
20 | 58,753,528 | 59,651,027 | 897 | 12 | 0/<4.7×10−15 | 3.3753/3.8×10−3 | - | - |
10 | 20,012,520 | 21,553,899 | 1541 | 6 | 1.175/0.049 | 0.7817/5.7×10−3 | - | - |
11 | 132,525,133 | 133,419,195 | 1393 | 14 | 3.97b/9.5×10−4 | 2.3364/1.9×10−6 | - | - |
| ||||||||
P0 self-overlapping sets (324 comparisons) | ||||||||
16 | 7,988,699 | 7,990,230 | 1.5 | 2 | 0.12/1.00 | 0.0407/0.21 | 0.77 | 0.84 |
9 | 1,864,696 | 1,868,831 | 4.1 | 2 | 0.019b/0.05 | 0.1090/1.00 | - | 0.81 |
20 | 58,753,528 | 59,651,027 | 897 | 12 | <1×10−6/<1.5×10−12 | 3.3753/0.019 | - | - |
15 | 21,445,700 | 21,732,000 | 286 | 3 | <1×10−6/<1.5×10−12 | 1.2007/1.00 | - | - |
| ||||||||
Non-hotspot overlappingc (135 comparisons) | ||||||||
3 | 197,249,108 | 197,250,198 | 1.1 | 1 | 0.0035b/1.00 | 0.0027/0.33 | NDd | - |
4 | 18,404,324 | 18,406,601 | 2.3 | 1 | <1×10−6/<1.2×10−4 | 0.0072/0.88 | 1.0 | 1.2 |
p-value calculated as the chance of expecting equal or more recombination events from historical data than in P0 from 91 meioses using binomial statistics, and further adjusted with Bonferroni correction.
2002 deCODE data.
Only showing ones with sperm typing results.
Recombination activity not detected in P0.
See also Figure S2.