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. 2012 Dec 18;7(12):e52470. doi: 10.1371/journal.pone.0052470

Table 1. Constitutive proteins secreted by Paracoccidioides Pb01 yeast and mycelia.

General Information number (NCBI) 1 Protein description Number of isoforms in Paracoccidioides secretome 2 Amount of isoform abundances 3 ANOVA (p-value) 4 SignalP Score ≥0.5 5 SecretomeP Score ≥0.5 6
1. CELL RESCUE, DEFENSE and VIRULENCE
gi|295659787 heat shock protein Hsp88 1 1.24 0.3645 NO NO
gi|295659837 heat shock protein SSB1 1 2.77 0.0779 NO 0.8618
gi|295669402 Mn superoxide dismutase 1 1.82 0.3780 NO 0.8823
2. METABOLISM
2.1. Amino Acid Metabolism
gi|295667902 aminomethyltransferase 1 1.52 0.2302 NO 0.6367
gi|295658698 fumarylacetoacetase 4 1.50 0.7047 NO 0.7492
gi|295658947 O-acetylhomoserine (thiol)-lyase 1 1.00 0.9268 NO 0.7930
gi|225683737 spermidine synthase 1 1.93 0.0864 NO NO
2.2. Nucleotide Metabolism
gi|295674697 adenosine kinase 2 0.21 0.0646 NO NO
2.3. Secundary Metabolism
gi|295666938 nucleoside diphosphate kinase 1 1.01 0.5725 NO NO
2.4. Phosphate Metabolism
gi|295662360 mannitol-1-phosphate 5-dehydrogenase 3 0.42 0.0766 NO NO
2.5. C-Compound and Carbohydrate Metabolism
gi|295667790 beta-glucosidase 1 1.63 0.2116 0.999 0.8279
gi|295663469 glycosyl hydrolase 1 1.77 0.1350 0.996 0.8631
gi|295665168 TOS1 1 1.00 0.7772 0.999 0.9249
3. ENERGY
3.1. Glycolysis and Gluconeogenesis
gi|295672732 enolase 4 0.67 0.0832 NO 0.5000
gi|295671120 fructose-bisphosphate aldolase 5 398.84 0.0549 NO 0.6628
gi|295658119 glyceraldehyde-3-phosphate dehydrogenase 2 0.76 0.4655 NO 0.9120
gi|295669690 phosphoglycerate kinase 1 1.05 0.3639 NO 0.6626
gi|225678203 NmrA-like family protein 1 1.01 0.5624 NO 0.5898
3.3. Tricarboxylic-acid Pathway
gi|295673937 malate dehydrogenase 1 1.36 0.0834 0.764 0.8163
gi|295668473 dihydrolipoyl dehydrogenase 3 17.92 0.0541 0.571 NO
4. CELL CYCLE AND DNA PROCESSING
gi|295664474 cell division cycle protein 1 1.24 0.2116 NO NO
gi|295658863 Cofilin/tropomyosin-type actin- binding family protein 2 1.91 0.0093 NO NO
gi|295672736 DNA damage checkpoint protein rad24 2 0.86 0.0693 NO NO
5. PROTEIN FATE (folding, modification, destination)
gi|295663907 peptidyl-prolyl cis-trans isomerase A2 1 1.06 0.4941 0.975 0.8963
gi|295672668 peptidyl-prolyl cis-trans isomerase B 2 191.86 0.0920 0.928 NO
gi|295662699 peptidyl-prolyl cis-trans isomerase cypE 1 1.12 0.2723 NO 0.8712
gi|295672447 peptidyl-prolyl cis-trans isomerase H 3 144.1 0.0755 NO 0.7266
gi|295665666 Grp1p protein 1 1.06 0.6021 NO 0.9061
6. UNCLASSIFIED PROTEINS
gi|295667926 conserved protein 1 1.01 0.7060 0.972 0.9280
gi|295657286 conserved protein 1 1.00 0.7950 NO 0.8050
1

NCBI database general information number (http://www.ncbi.nlm.nih.gov/).

2

Number of identified isoforms of protein in Paracoccidioides, Pb01 secretome.

3

The average of amount of values of abundances of all identified isoforms used to statistical test.

4

ANOVA – statistically significant differences are considered with p<0.05 (*).

5

Secretion prediction according to Signal P 3.0 server, the number corresponds to signal peptide probability (http://www.cbs.dtu.dk/services/SignalP/).

6

Secretion prediction according to Secretome P 2.0 server, the number corresponds to neural network that exceeded a value of 0.5 (NN-score 0.50) (http://www.cbs.dtu.dk/services/SecretomeP/).