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. 2011 Jul 1;5(5):441–452. doi: 10.1186/1479-7364-5-5-441

Table 1.

Primer sequences used for the mutational analysis of β-catenin and APC genes in the Wnt pathway

Gene Amplicon Primer sequence Amplicon size (bp) Annealing temperature (°C)
β-catenin Exon 3 BCat F: 5'-ATG GAA CCA GAC AGA AAA GC-3'
BCat R: 5'-GCT ACT TGT TCT TGA GTG AAG-3'
200 58
APC Exon 15 APC A F: 5'-CAGACTTATTGTGTAGAAGA- 3'
APC A R: 5'-ATCCTGAAGAAAATTCAACA-3'
295 for codons
1260 to 1359
52
APC B F: 5'-AGGGTTCTAGTTTATCTTCA-3'
APC B R: 5'-TCTGCTTGGTGGCATGGTTT-3'
293 for codons
1339 to 1436
55
APC C F: 5'-GGCATTATAAGCCCCAGTGA-3'
APC C R: 5'-AAATGGCTCATCGAGGCTCA-3'
290 for codons
1417 to 1516
55
APC D F: 5'-ACTCCAGATGGATTTTCTTG-3'
APC D R: 5'-GGCTGGCTTTTTTGCTTTAC-3'
300 for codons
1497 to 1596
55