Table 1.
Primer sequences used for the mutational analysis of β-catenin and APC genes in the Wnt pathway
Gene | Amplicon | Primer sequence | Amplicon size (bp) | Annealing temperature (°C) |
---|---|---|---|---|
β-catenin | Exon 3 | BCat F: 5'-ATG GAA CCA GAC AGA AAA GC-3' BCat R: 5'-GCT ACT TGT TCT TGA GTG AAG-3' |
200 | 58 |
APC | Exon 15 | APC A F: 5'-CAGACTTATTGTGTAGAAGA- 3' APC A R: 5'-ATCCTGAAGAAAATTCAACA-3' |
295 for codons 1260 to 1359 |
52 |
APC B F: 5'-AGGGTTCTAGTTTATCTTCA-3' APC B R: 5'-TCTGCTTGGTGGCATGGTTT-3' |
293 for codons 1339 to 1436 |
55 | ||
APC C F: 5'-GGCATTATAAGCCCCAGTGA-3' APC C R: 5'-AAATGGCTCATCGAGGCTCA-3' |
290 for codons 1417 to 1516 |
55 | ||
APC D F: 5'-ACTCCAGATGGATTTTCTTG-3' APC D R: 5'-GGCTGGCTTTTTTGCTTTAC-3' |
300 for codons 1497 to 1596 |
55 |