AutoDockTools |
Standalone: Windows, Linux, MacOS |
Pre-compiled and source code Free for academic use |
Proprietary (DLG) |
AutoDock |
10 |
URL |
http://autodock.scripps.edu/resources/adt |
DockingServer Jmol- and VMD-based |
Web-based, platform independent |
Commercial product, limited free use |
PDB |
AutoDock |
36 |
URL |
http://www.dockingserver.com/web |
LIGPLOT |
Stand alone: Windows, Linux |
Pre-compiled Free for academic use |
PDB, Proprietary (HHB, NNB) |
PDB |
34 |
URL |
http://www.ebi.ac.uk/thornton-srv/software/LIGPLOT/ |
POLYVIEW-MM Jmol- and PyMol-based |
Web-based, platform independent |
Free for everyone |
PDB, Proprietary (DLG) |
Any ligand docking program with output in the PDB format |
38 |
URL |
http://polyview.cchmc.org/conform.html |
ViewDock, Chimera-based |
Standalone: Windows, Linux, MacOS |
Pre-compiled and source code Free for academic use |
PDB, MOL2, Proprietary (MORDOR) |
DOCK |
37 |
URL |
http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/viewdock/framevd.html |
vsLab, VMD-based |
Standalone: Linux, MacOS |
Source code Free for everyone |
PDB, MOL2 |
AutoDock |
35 |
URL |
http://www.fc.up.pt/pessoas/nscerque/vsLab/vLab/HomePage.html |