Table 1.
Promoter fragments | DNA probe | Kdtaq, nM | Kdec, nM | Kdtaq/Kdec |
---|---|---|---|---|
Oligos | 1. −12/+2 | 100 | 160 | 0.63 |
3. −12/+2; ggga | 15 | 110 | 0.14 | |
4. −12/+2; ccct | 2200 | 690 | 3.2 | |
5. −12/−6 | 54000 | 80000 | 0.68 | |
Upstream fork junctions | 6. [−38/−11][−38/−12] | 13.7 | 5 | 2.8 |
7. [−38/−11][−38/−12]TG | 1.2 | 0.43 | 2.8 | |
8. [−38/−8][−38/−12] | 0.8 | 0.14 | 5.7 | |
9. [−38/−7][−38/−12] | <0.2 | <0.2 | ||
10. [−38/−7][−38/−12] −35mut | 0.57 | 2.1 | 0.27 | |
11. [−26/−3][−26/−12] | 0.65 | 0.46 | 1.4 | |
12. [−59/−11][−59/−12]UPec | 4.1 | 0.008 | 510 | |
13. [−59/−11][−59/−12]UPth | 3.4 | 0.35 | 9.7 | |
Downstream fork junctions | 14. [−12/+20][+3/+20] | 1.6 | <0.2 | >8 |
15. [−12/+20][+3/+20]ggga | 0.2 | <0.2 | ||
16. [−11/+14][+2/+14] | 42 | 0.25 | 170 |
The Kd values presented are averages obtained from two to three individual experiments, the error is ±15%.