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. 2012 Oct 18;40(22):11352–11362. doi: 10.1093/nar/gks973

Table 1.

Dissociation constants for the binding of promoter fragments to TaqA and Ec70 at 25°C

Promoter fragments DNA probe Kdtaq, nM Kdec, nM Kdtaq/Kdec
Oligos 1. −12/+2 100 160 0.63
3. −12/+2; ggga 15 110 0.14
4. −12/+2; ccct 2200 690 3.2
5. −12/−6 54000 80000 0.68
Upstream fork junctions 6. [−38/−11][−38/−12] 13.7 5 2.8
7. [−38/−11][−38/−12]TG 1.2 0.43 2.8
8. [−38/−8][−38/−12] 0.8 0.14 5.7
9. [−38/−7][−38/−12] <0.2 <0.2
10. [−38/−7][−38/−12] −35mut 0.57 2.1 0.27
11. [−26/−3][−26/−12] 0.65 0.46 1.4
12. [−59/−11][−59/−12]UPec 4.1 0.008 510
13. [−59/−11][−59/−12]UPth 3.4 0.35 9.7
Downstream fork junctions 14. [−12/+20][+3/+20] 1.6 <0.2 >8
15. [−12/+20][+3/+20]ggga 0.2 <0.2
16. [−11/+14][+2/+14] 42 0.25 170

The Kd values presented are averages obtained from two to three individual experiments, the error is ±15%.