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. 2012 Dec 19;7(12):e51931. doi: 10.1371/journal.pone.0051931

Table 3. Performance of microbial standard DNA in qPCR reactions.

16S Standardtype Standard curvea R2 Efficiency (%)b
Bacteriac Amplicon y = −3.74±0.03x +37.41±0.21 0.999 84.9
Linear y = −3.75±0.02x +38.05±0.14 0.999 84.7
Nicked circles y = −3.61±0.04x +37.49±0.20 0.999 87.3
Supercoiled y = −3.63±0.03x +38.26±0.15 0.999 88.7
Archaead Amplicon y = −3.64±0.01x +36.99±0.07 0.999 88.4
Linear y = −3.62±0.06x +37.22±0.32 0.999 89.0
Nicked circles y = −3.48±0.06x +36.62±0.31 0.999 93.7
Supercoiled y = −3.56±0.02x +37.15±0.13 0.999 91.0
a

Linear regression between Ct (y-intercept) and log10 starting copy number (x, i.e. slope).

b

Efficiency (%) calculated: E = (101/slope−1)×100.

c

Bacteria: T. lienii.

d

Archaea: A. fulgidus.