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. 2012 Aug 8;13:380. doi: 10.1186/1471-2164-13-380

Table 3.

Expression and secretome data of predicted protein hydrolases

 
  
  
  
 Transcriptomic data
  
 
  
  
  
 Expressiona
  
 Fold changesb
  
 FDR q-valuesb
  
 Secretome datac
Identifier Gene (Predicted) function   Expd Day 1 Day 3 Day 6   Day 1 Day 3 Day 6   Day 1 Day 3 Day 6   Expd Day 1 Day 3 Day 6
SPepresent
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
An01g00530
 pepB
 A4 family peptidase
  
 0.6
 84.9
 32.5
 113.9
  
 148.1
 56.7
 198.8
  
 1.4E-16
 9.1E-16
 5.9E-17
  
 -
 -
 -
 -
An14g04710
 pepA
 Aspartyl protease
  
 1.4
 180.1
 34.7
 70.5
  
 130.2
 25.1
 51.0
  
 1.9E-13
 2.2E-11
 2.2E-12
  
 +++∗
 ++++++
 ++++++
 ++++++
An01g01750
  
 Subtilisin-like serine protease
  
 1.1
 45.8
 9.8
 8.9
  
 40.0
 8.6
 7.7
  
 2.3E-14
 9.5E-12
 1.5E-11
  
 -
 +++
 ++++
 +++
An02g01550
  
 Secreted serine protease
  
 2.4
 63.2
 25.3
 6.0
  
 26.0
 10.4
 2.5
  
 8.6E-10
 4.8E-08
 9.8E-04
  
 ++∗
 ++++
 ++++∗
 -
An08g04640
  
 Lysosomal pepstatininsensitive protease
  
 1.1
 16.2
 8.0
 10.6
  
 14.3
 7.1
 9.3
  
 4.0E-12
 1.5E-10
 3.2E-11
  
 +∗
 ++++
 +++++
 ++++
An06g00190
  
 Lysosomal pepstatininsensitive protease
  
 2.3
 31.5
 27.2
 25.9
  
 13.4
 11.6
 11.0
  
 1.1E-10
 2.3E-10
 2.8E-10
  
 +++∗
 ++++
 +++++
 ++++
An03g01010
  
 Lysosomal pepstatininsensitive protease
  
 1.2
 14.9
 3.2
 4.2
  
 12.7
 2.7
 3.6
  
 1.2E-09
 4.8E-05
 3.6E-06
  
 +∗
 +++∗
 +++∗
 +++∗
An02g04690
  
 Serine-typecarboxypeptidase I
  
 6.4
 64.7
 31.7
 34.9
  
 10.1
 4.9
 5.4
  
 9.7E-10
 8.4E-08
 4.2E-08
  
 ++
 ++++∗
 +++++
 +++++
An12g05960
  
 Dipeptidyl peptidase II
  
 1.0
 9.2
 4.1
 2.7
  
 9.0
 4.0
 2.6
  
 2.8E-11
 7.3E-09
 4.78-07
  
 -
 +++∗
 ++++
 ++++
An07g08030
 pepF
 Serine carboxypeptidase
  
 0.8
 7.0
 4.2
 6.3
  
 8.6
 5.2
 7.7
  
 1.2E-11
 2.7E-10
 2.2E-11
  
 -
 ++∗
 +++
 +++∗
An11g06350
  
 Carboxypeptidase
  
 1.1
 8.3
 3.6
 1.7
  
 7.9
 3.4
 1.6
  
 5.0E-11
 2.1E-08
 5.0E-04
  
 -
 -
 -
 -
An09g03780
 pepD
 Subtilisin-like serineprotease
  
 0.5
 3.0
 0.6
 0.7
  
 5.8
 1.1
 1.4
  
 2.2E-11
 1.6E-01
 2.4E-03
  
 -
 -
 -
 -
An12g03300
  
 Aspartic protease
  
 0.7
 3.4
 0.5
 0.4
  
 5.0
 0.7
 0.7
  
 1.1E-08
 1.2E-02
 1.0E-02
  
 ++∗
 +++
  
  
An15g06280
  
 Aspartic proteinase[truncated ORF]
  
 5.8
 25.2
 33.2
 22.4
  
 4.3
 5.7
 3.8
  
 4.1E-09
 6.1E-10
 1.2E-08
  
 ++∗
 +++∗
 ++++∗
 ++++∗
An16g09010
  
 Carboxypeptidase I[putative frameshift]
  
 0.6
 2.2
 3.6
 4.7
  
 4.0
 6.4
 8.4
  
 2.5E-09
 8.8E-11
 1.8E-11
  
 -
 -
 +++∗
 +++
An14g00620
  
 Aminopeptidase
  
 5.3
 20.4
 14.7
 14.3
  
 3.8
 2.8
 2.7
  
 4.6E-09
 1.3E-07
 1.8E-07
  
 -
 -
 -
 -
An07g03880
 pepC
 Serine proteinase
  
 31.1
 111.2
 101.5
 91.5
  
 3.6
 3.3
 2.9
  
 8.5E-12
 2.2E-11
 6.3E-11
  
 ++∗
 -
 -
 -
An07g10060
  
 Proteinase B inhibitor
  
 4.2
 13.1
 17.0
 19.5
  
 3.1
 4.1
 4.7
  
 1.1E-08
 1.1E-09
 3.5E-10
  
 +++∗
 -
 -
 -
An02g07210
 pepE
 Aspartic protease
  
 30.4
 83.9
 57.8
 57.2
  
 2.8
 1.9
 1.9
  
 1.4E-10
 3.3E-08
 3.9E-08
  
 -
 ++++
 +++∗
 ++∗
An15g07700
  
 Aspergillopepsin IIprecursor
  
 1.3
 3.5
 3.3
 4.4
  
 2.7
 2.6
 3.4
  
 3.5E-07
 5.2E-07
 3.1E-08
  
 -
 -
 -
 -
An18g01320
  
 Extracellular proteaseprecursor
  
 21.9
 54.8
 14.7
 4.9
  
 2.5
 0.7
 0.2
  
 1.8E-05
 1.5E-02
 6.8E-08
  
 +++∗
 ++++
 +++++∗
 ++++
An02g13740
  
 Gly-X carboxypeptidaseprecursor
  
 1.9
 4.4
 4.2
 4.4
  
 2.3
 2.2
 2.4
  
 9.5E-09
 2.1E-08
 8.6E-09
  
 -
 -
 -
 -
An03g01660
  
 Vacuolar aminopeptidase Y
  
 9.1
 19.2
 17.4
 17.5
  
 2.1
 1.9
 1.9
  
 3.1E-09
 1.9E-08
 1.5E-08
  
 ++∗
 -
 -
 -
An08g08750
 cpY
 Carboxypeptidase
  
 33.8
 67.9
 53.8
 51.3
  
 2.0
 1.6
 1.5
  
 1.0E-08
 1.3E-06
 4.2E-06
  
 ++∗
 -
 -
 -
An14g03250
  
 Aspergillopepsin II
  
 0.7
 1.2
 0.9
 1.6
  
 1.7
 1.3
 2.2
  
 2.5E-04
 3.0E-02
 3.1E-06
  
 -
 +++∗
 -
 -
An07g10410
  
 Metalloprotease
  
 1.2
 1.3
 7.5
 16.1
  
 1.1
 6.5
 13.9
  
 2.8E-01
 8.3E-11
 1.6E-12
  
 -
 -
 -
 -
SPeabsent
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
An01g00370
  
 Aspergillopepsin
  
 0.8
 89.0
 16.8
 10.0
  
 110.2
 20.8
 12.3
  
 3.6E-14
 4.9E-12
 3.9E-11
  
 ++∗
 +++++
 +++++
 +++++
An02g00090
  
 Prolidase
  
 0.4
 20.4
 22.7
 7.6
  
 53.2
 59.4
 19.8
  
 1.2E-14
 1.0E-14
 1.9E-13
  
 -
 -
 -
 -
An14g02080
  
 Prolidase
  
 1.8
 18.0
 6.8
 4.1
  
 9.7
 3.7
 2.2
  
 4.4E-09
 2.8E-06
 3.8E-04
  
 -
 -
 -
 -
An09g02830
  
 Acylaminoacyl-peptidase
  
 4.3
 39.7
 18.0
 9.9
  
 9.2
 4.2
 2.3
  
 1.8E-12
 3.0E-10
 1.6E-07
  
 -
 -
 -
 -
An17g00390
  
 Aminopeptidase
  
 4.6
 27.7
 10.2
 7.4
  
 6.0
 2.2
 1.6
  
 3.2E-11
 5.1E-07
 1.2E-04
  
 -
 -
 -
 -
An18g03980
  
 Glutamatecarboxypeptidase II
  
 3.2
 19.0
 13.8
 13.7
  
 5.9
 4.3
 4.3
  
 3.3E-12
 3.3E-11
 3.4E-11
  
 -
 -
 -
 -
An01g01720
  
 Bleomycin hydrolase
  
 0.6
 3.3
 1.4
 1.0
  
 5.4
 2.3
 1.7
  
 1.6E-10
 8.4E-07
 1.0E-04
  
 -
 -
 -
 -
An07g06490
  
 Insulin-degrading enzyme
  
 0.4
 2.1
 1.1
 1.1
  
 5.2
 2.7
 2.7
  
 8.5E-11
 2.9E-08
 3.7E-08
  
 -
 -
 -
 -
An11g05920
  
 Prolidase
  
 0.9
 4.6
 1.5
 1.3
  
 5.0
 1.6
 1.4
  
 5.2E-08
 9.1E-03
 5.3E-02
  
 -
 -
 -
 -
An11g02950
  
 Calpain family cysteine protease
  
 0.9
 3.6
 3.2
 1.7
  
 4.3
 3.7
 2.0
  
 9.8E-10
 3.4E-09
 6.0E-06
  
 -
 -
 -
 -
An01g14920
  
 Metallopeptidase
  
 0.5
 1.8
 1.3
 1.1
  
 3.9
 2.8
 2.3
  
 1.1E-09
 4.0E-08
 4.1E-07
  
 -
 -
 -
 -
An11g01970
  
 Pyroglutamyl peptidase
  
 2.1
 8.2
 6.0
 6.8
  
 3.9
 2.8
 3.2
  
 1.0E-11
 2.4E-10
 6.2E-11
  
 -
 -
 -
 -
An14g01530
  
 Subtilisin-like serine proteases
  
 0.5
 2.0
 1.1
 0.7
  
 3.7
 2.1
 1.3
  
 9.9E-09
 7.0E-06
 2.6E-02
  
 -
 -
 -
 -
An09g06800
  
 Leucyl aminopeptidase
  
 10.9
 40.3
 37.7
 33.4
  
 3.7
 3.5
 3.1
  
 1.3E-11
 2.5E-11
 8.2E-11
  
 -
 -
 -
 -
An12g01820
  
 Ubiquitin carboxyl-terminal hydrolase
  
 0.8
 2.6
 1.7
 1.1
  
 3.4
 2.2
 1.5
  
 8.1E-10
 2.0E-07
 4.4E-04
  
 -
 -
 -
 -
An01g08470
  
 Ubiquitin carboxyl-terminal hydrolase
  
 1.8
 5.9
 7.5
 7.4
  
 3.3
 4.2
 4.1
  
 6.1E-10
 8.3E-11
 9.6E-11
  
 -
 -
 -
 -
An04g00410
  
 Dipeptidyl peptidase III
  
 17.0
 51.9
 37.8
 29.6
  
 3.1
 2.2
 1.7
  
 9.6E-10
 5.6E-08
 3.4E-06
  
 -
 -
 -
 -
An16g08150
  
 Dipeptidyl-peptidase V
  
 10.5
 26.0
 17.4
 17.2
  
 2.5
 1.7
 1.6
  
 4.3E-09
 4.1E-06
 4.9E-06
  
 -
 -
 -
 -
An18g02980
  
 Endopeptidase
  
 4.6
 10.4
 8.3
 8.2
  
 2.3
 1.8
 1.8
  
 4.0E-09
 2.0E-07
 2.6E-07
  
 -
 -
 -
 -
An04g06940 prtT Transcriptional activator of proteases   5.4 58.4 35.2 24.9   10.8 6.5 4.6   5.7E-12 9.8E-11 1.0E-09   - - - -

amRNA abundance relative (%) to the gamma-actin (An15g00560) encoding transcript during exponential growth.

bFold changes and FDR q-values for comparisons with transcriptome data from the exponential growth phase.

cProtein abundance in filtrates: (-) not detected; (+) < 5 ng ml−1; (++) < 50 ng ml−1; (+++) < 250 ng ml−1; (++++) < 1 μg ml−1; (+++++) < 4 μg ml−1; (++++++) > 4 μg ml−1; (∗) biological and/or technical relative standard deviation above 100 and 50, respectively.

dExponential growth phase.

eSignal peptide sequence prediction [43].