Table 4.
Expression data of predicted conidiation genes
| |
|
|
Expressiona |
|
Fold changesb |
|
FDR q-valuesb |
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ORF | Gene | (Predicted) function | Expc | Day 1 | Day 3 | Day 6 | Day 1 | Day 3 | Day 6 | Day 1 | Day 3 | Day 6 | ||
|
Fluffy genes | ||||||||||||||
| An14g03390 |
fluG |
Synthesis of small extracellular factor |
1.9 |
1.0 |
1.3 |
1.8 |
|
0.5 |
0.7 |
0.9 |
|
3.1E-08 |
3.7E-05 |
3.0E-01 |
| An02g03160 |
flbA |
Regulator of G-protein signalling |
0.9 |
0.8 |
0.9 |
1.2 |
|
0.9 |
1.0 |
1.4 |
|
3.3E-01 |
7.9E-01 |
5.4E-04 |
| An15g03710 |
flbB |
Transcription factor |
2.6 |
2.5 |
2.1 |
2.5 |
|
1.0 |
0.8 |
1.0 |
|
6.6E-01 |
3.6E-02 |
7.8E-01 |
| An02g05420 |
flbC |
Transcription factor |
1.1 |
2.4 |
4.5 |
8.2 |
|
2.1 |
4.0 |
7.2 |
|
4.0E-05 |
3.3E-08 |
5.1E-10 |
| An01g04830 |
flbD |
Transcription factor |
1.3 |
8.2 |
6.3 |
9.0 |
|
6.3 |
4.8 |
6.9 |
|
1.0E-09 |
7.3E-09 |
6.2E-10 |
| An08g07210 |
flbE |
Activator functionally associated with FlbB |
1.9 |
2.0 |
3.4 |
4.5 |
|
1.1 |
1.8 |
2.4 |
|
3.7E-01 |
2.3E-06 |
2.7E-08 |
| An08g06130 |
fadA |
Heterotrimeric G-protein α-subunit |
15.2 |
18.8 |
18.4 |
19.8 |
|
1.2 |
1.2 |
1.3 |
|
2.0E-03 |
4.0E-03 |
2.6E-04 |
|
Conidiophore development | ||||||||||||||
| An01g10540 |
brlA |
Transcription factor |
0.4 |
0.4 |
13.4 |
17.0 |
|
1.1 |
37.0 |
46.8 |
|
8.5E-01 |
3.5E-10 |
1.7E-10 |
| An01g03750 |
abaA |
Transcription factor |
1.1 |
1.0 |
14.1 |
31.9 |
|
0.9 |
12.6 |
28.6 |
|
1.7E-01 |
3.1E-12 |
1.3E-13 |
| An01g08900 |
wetA |
Transcription factor |
0.8 |
0.8 |
1.5 |
4.2 |
|
0.9 |
1.8 |
5.1 |
|
4.6E-01 |
5.1E-06 |
3.2E-11 |
| An02g02150 |
medA |
Transcription factor |
1.6 |
3.6 |
3.8 |
2.5 |
|
2.2 |
2.3 |
1.5 |
|
6.2E-08 |
2.8E-08 |
7.1E-05 |
| An05g00480 |
stuA |
Transcription factor |
12.5 |
28.0 |
49.7 |
48.7 |
|
2.2 |
4.0 |
3.9 |
|
5.3E-07 |
1.0E-09 |
1.2E-09 |
|
Pigmentation genes and hydrophobins | ||||||||||||||
| An03g02400 |
hypC |
Hydrophobin |
0.6 |
0.6 |
261.2 |
333.0 |
|
1.1 |
436.9 |
557.1 |
|
8.7E-01 |
4.0E-10 |
2.4E-10 |
| An08g09880 |
|
Hydrophobin |
0.5 |
0.5 |
180.5 |
229.9 |
|
1.1 |
360.5 |
459.1 |
|
8.9E-01 |
5.0E-10 |
3.0E-10 |
| An03g02360 |
hypB |
Hydrophobin |
0.5 |
0.4 |
162.4 |
214.5 |
|
0.9 |
345.1 |
455.8 |
|
7.3E-01 |
5.8E-10 |
3.2E-10 |
| An14g05350 |
olvA |
Hydrolase involved in pigmentation |
1.6 |
11.1 |
153.3 |
205.4 |
|
6.8 |
94.2 |
126.2 |
|
8.2E-07 |
3.7E-11 |
1.8E-11 |
| An01g13660 |
yA |
Laccase invovled in pigmenation |
0.8 |
1.0 |
46.1 |
20.6 |
|
1.2 |
56.5 |
25.3 |
|
3.6E-01 |
2.3E-11 |
3.0E-10 |
| An14g05370 |
brnA |
Multicopper oxidase involved in pigmentation |
0.7 |
0.5 |
33.0 |
39.9 |
|
0.7 |
46.3 |
55.9 |
|
3.1E-01 |
1.8E-09 |
9.6E-10 |
| An01g10940 |
hypA |
Hydrophobin |
0.4 |
0.4 |
12.3 |
15.0 |
|
0.8 |
29.3 |
35.6 |
|
5.1E-01 |
1.3E-09 |
6.4E-10 |
| An07g03340 |
hypE |
Hydrophobin |
1.9 |
2.4 |
26.9 |
62.3 |
|
1.3 |
14.4 |
33.4 |
|
3.9E-01 |
9.6E-08 |
3.8E-09 |
| An09g05730 |
fwnA |
Polyketide synthase involved in pigmentation |
2.4 |
1.2 |
18.8 |
36.0 |
|
0.5 |
7.7 |
14.7 |
|
2.6E-03 |
3.6E-08 |
1.4E-09 |
| An09g05530 | hypG | Hydrophobin | 0.5 | 0.4 | 0.8 | 1.7 | 0.8 | 1.5 | 3.3 | 2.4E-02 | 4.4E-04 | 2.1E-09 | ||
amRNA abundance relative (%) to the gamma-actin (An15g00560) encoding transcript during exponential growth.
bFold changes and FDR q-values for comparisons with transcriptome data from the exponential growth phase.
cExponential growth phase.