Table 2.
Gene and unigene annotations for rose and related species
| V | M | S | H | Apple | Strawberry | Peach | Grape | |
|---|---|---|---|---|---|---|---|---|
|
Gene/unigene |
35,657 |
31,434 |
34,725 |
39,722 |
63,541 |
34,809 |
28,702 |
26,346 |
|
BLAST matcha |
18,414 |
19,214 |
20,264 |
20,349 |
51,525 |
24,764 |
26,163 |
26,346 |
|
Contigs |
9,062 |
9,425 |
9,395 |
9,816 |
|
|
|
|
|
Singlets |
9,352 |
9,699 |
10,869 |
10,533 |
|
|
|
|
|
Domainsb | ||||||||
|
Total |
10,646 |
11,353 |
11,642 |
11,265 |
72,220 |
36,042 |
37,433 |
32,566 |
| Distinct | 2,262 | 2,315 | 2,383 | 2,369 | 3,311 | 3,333 | 3,297 | 3,305 |
a The number of gene or unigene annotated by BLAST search against NR database with expect value (e-value) lower than 1e-10.
b Number of domain identified by implementing Pfam. Abbreviations: V: ‘Vital’; M: ‘Maroussia’; S: ‘Sympathy’; H: ‘Haedang’.