Table 1. Overview of the mutations present in the recH342 strain identified by nucleotide sequencing.
Genome positiona | Locusa | Gene | Gene product | Referenceb | Testb | Amino acid changec |
330380 | 329774–330739 | ldh | L-lactate dehydrogenase | AAA (607) | GAA | K203E |
925934 | 925633–926427 | yfhG | Hypothetical recombination regulator, RecX | CTT (302) | CCT | L101P |
1041854 | 1041994–1042842 | dat | Intergenic, D-alanine aminotransferase | T | G | - |
1283580 | 1283463–1284362 | yjfC | Hypothetical protein BSU12130 | ACC | GCC | T40A |
2893906 | c2894709–2893681 | ilvC | Ketol-acid reductoisomerase | GCG (207) | GCA | A69A (silent) |
2982417 | c2982269–2981151 | citZ | Intergenic, citrate synthase | T | A | - |
2982437 | c2983067–2982603 | ytwI | Intergenic, hypothetical protein | T | C | - |
3024588 | c3025266–3023677 | ytcI | Acyl-CoA synthetase | GTA (685) | ATA | V227I |
3051461 | c3052583–3049725 | sftA | DNA translocase | CCA (1123) | TCA | P236S |
The single genome position presenting the mutated nucleotide position, and the locus interval are shown, where the c denotes the complementary strand.
The underlined bases represent the bases that were present in the Reference (BG214) and the Test (recH342) sample, and between parentheses the exchanged nucleotide number.
The position and substitution of the mutated residue.