Table 2. List of primers used for expression studies.
| Primers used for cDNA synthesis | Primer sequence (5′ - 3′) used for PCR or qRT |
| Experiment: Sequencing PEP1 cDNAs from accessions ( Figure 3E , Table 1 , Table S2) | |
| Oligo-dT | PEP1_5UTRF1: AACGCTTAGTATCTCAGGCGACPEP1_5UTRF2: CCTTCTCGGAGACAGAAGCCPEP1_3UTRR1: AGTCTCTCAGCCATAGAGAG |
| Experiment: PEP1 expression ( Figure 2A , PEP1 primers as in [2] ) | |
| Oligo-dT | PEP1(a+b)F: CTTGTCGTCTCCTCCTCTGGPEP1(a+b)R: ACTACGGCGAGAGCAGTTTCAaPP2AF: AGTATCGCTTCTCGCTCCAGAaPP2AR: AACCGGTTGGTCGACTATTG |
| Experiment: Expression of different PEP1 transcripts in accession Dor ( Figure 5D, 5E, 5F ) | |
| PEP1_3UTRR1AaPP2AR | PEP1(a+b)F: CTTGTCGTCTCCTCCTCTGG [PEP1(a+b)]PEP1(a+b)R: ACTACGGCGAGAGCAGTTTCPEP1aF: GCTTAGTATCTCAGGCGAC [PEP1a]PEP1R: TGCGACGTTTAGAGAAGGTGPEP1bF: GAACAACCGATATTGATGCTC [PEP1b]PEP1R: TGCGACGTTTAGAGAAGGTGAaPP2AF: AGTATCGCTTCTCGCTCCAGAaPP2AR: AACCGGTTGGTCGACTATTG |
| Experiment: 5′RACE | |
| PEP1(a+b)R | NESTR1: GATCATCTGCATGTCGTTTTCC |