Table 1. Genes up-regulated in daf-10(m79) mutants versus wild-type animals.
Gene | Brief description | p value | Fold change | qRT-PCR data | DAF-16 target? | DAF-12 target? | Pathogen-responsive? | Tissue expression? |
F56A4.3 | Glutathione-S-tranferase | 8.20E-05 | 18.42 | Not repeated | ||||
Y19D10A.7/irld-53 | EGF receptor, L-domain | 5.73E-04 | 6.44 | D*, E | Neuronal (enriched, H) | |||
W02D7.8 | Unknown | 0.003 | 4.47 | Neuronal (expressed, H) | ||||
F14D7.7 | Unknown | 0.003 | 4.41 | |||||
K12G11.3/dod-11 (sodh-1) | Alcohol dehydrogenase | 0.006 | 4.09 | Up in osm-5(p813) | A, C | F | Intestinal (expressed, I) | |
ZC84.3/cls-3 | CLASP-family microtubule binding protein | 0.006 | 3.64 | Neuronal (enriched, H) | ||||
Y19D10A.12/mct-1/2 | Monocarboxylate transporter | 0.007 | 3.55 | Up in daf-10(m79), down in osm-5(p813) | E | |||
ZK105.5 | Unknown, DUF19 | 0.011 | 3.26 | Not repeated | C | |||
F53A3.1 | Unknown | 0.016 | 3.21 | |||||
F45D11.14 | Unknown, DUF684 | 0.015 | 3.08 | |||||
F21C10.11 | Unknown | 0.016 | 3.03 | C | D* | |||
C09H5.2/catp-3 | Cation-transporting ATPase. Regulated by p38 MAP kinase pathway [33] | 0.016 | 2.99 | Up in osm-5(p813) | ||||
F53B2.2/tsp-4 | Tetraspanin family integral membrane protein | 0.018 | 2.98 | |||||
R08E5.4 | Unknown | 0.020 | 2.96 | B |
A = up-regulated in a daf-16-dependent fashion in daf-2 mutants, Murphy et al., 2003 [31].
B = up-regulated in a daf-16-dependent fashion in daf-2 mutants, McElwee et al., 2004 [35].
C = up-regulated in a daf-16-dependent fashion in daf-2 mutants, Lee et al., 2009 [34].
D* = down-regulated by DAF-12, Fisher and Lithgow, 2006 [30].
E = up-regulated by DAF-12, Shostak et al., 2004 [36].
F = repressed during PA14 exposure, Shapira et al., 2006 [32].
H = Von Stetina et al., 2007 [23].
(“Expressed”: genes whose expression is detected in the neurons, “Enriched”: genes that are solely or more highly expressed in neurons).
I = Pauli et al., 2006 [22].
(“Expressed”: genes whose expression is detected in the intestine, “Enriched”: genes that are solely or more highly expressed in intestine).