Table 3.
Predicted peptide-binding motifs for HLA class I alleles without sufficient binding data to make direct predictions.
| Pp | Paa | A23 | A26 | A32 | A34 | A36 | A43 | A66 | A68 | A69 | A74 | B62 | B75 | B72 | B63 | B37 | B61 | B41 | B46 | B48 | B49 | B50 | B52 | B55 | B57 | B58 | 859 | B67 | B73 | B78 | B81 |
| 1 | A | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 8.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | ||||||||||||||||||
| 1 | F | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0-3 | 0.3 | 0.3 | 0.3 | 0,3 | 0,3 | 0,3 | 0,3 | ||||||||
| 1 | R | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.4 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.4 | 0.3 | 0.3 | 0,3 | 04 | 0.3 | 0.3 | 0.4 | 0.4 | 0.5 | 0.3 | 0.4 | |||
| 2 | E | 0.5 | 0.7 | 0.7 | 0.7 | 0.7 | 0.7 | 0.7 | 0.7 | 0.7 | 0.7 | 0.7 | |||||||||||||||||||
| 2 | F | 0.3 | |||||||||||||||||||||||||||||
| 2 | I | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | |||||||||||||||
| 2 | L | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.4 | 0.5 | 0.5 | 0.4 | 0.5 | 0.5 | 0.3 | 0.3 | 0.5 | 0.5 | 0.3 | 0.5 | 0.5 | 0.3 | 0.4 |
| 2 | P | 0.5 | 0.8 | 0.5 | 0.8 | 0.3 | 0.5 | 0.8 | 0.8 | 0.8 | 0.5 | 0.8 | 0.8 | 0.8 | 0.8 | 0.7 | 0.8 | 0.8 | 0.8 | 0.8 | 0.6 | 0.6 | 0.8 | 0.8 | 0.8 | 0,8 | 0.8 | 0.8 | 0.8 | 0.8 | 0.8 |
| 2 | R | 0.4 | 0.4 | 0.4 | 0,4 | 0.4 | 0,4 | 0.4 | 0.5 | 0.5 | 0.7 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.7 | 0.5 | 0.5 | 0.5 | 07 | 0.5 | 0.5 | 0.7 | 0.7 | 0.9 | 0.5 | 07 | |||
| 2 | T | 03 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | |||||||||||||||||||
| 2 | V | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | |||||||||||
| 2 | Y | 0.7 | 0.5 | 0.5 | 0.5 | ||||||||||||||||||||||||||
| 3 | D | 0.3 | 0.4 | 0.3 | 0.4 | 0.4 | 0.4 | ||||||||||||||||||||||||
| 3 | F | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0,3 | 0.3 | |||||||||||||||||||
| 3 | K | 0.3 | 0.3 | ||||||||||||||||||||||||||||
| 3 | R | 0.3 | 0.4 | 0.4 | 0.3 | 0.4 | 0.3 | 0.3 | 0.4 | ||||||||||||||||||||||
| 3 | Y | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 04 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.4 | 0.3 | 0.3 | 0.3 | 0,4 | 0.3 | 0.3 | 0.4 | 0.4 | 0.5 | 0.3 | 0.4 | |||
| 3 | I | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.4 | 0.4 | 0.3 | 0.3 | 0.4 | 0.3 | 0.4 | 0.4 | 0.3 | |||||
| 3 | K | 0.4 | 0.5 | 0.5 | 0.4 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.4 | 0.4 | 0.5 | 0.5 | 04 | 0.4 | 0.4 | 0.4 | |||||||||||
| 9 | L | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 03 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | ||
| 9 | R | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | ||||||||||||||||||
| 8 | V | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.3 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.4 | 0.3 | 0.4 | 0.4 | 0.3 | |||||||
| 9 | Y | 0.3 | 0.6 | 0.4 | 0.3 | 0.6 | 0.6 | 0.4 | 0.4 | 0.4 | 0.4 | 0.6 | 0.3 | 0.3 | 0.6 | 0.6 | 0.3 | 0.3 | 0.3 | 0.3 |
Peptide-binding motifs are based on allele vectors in space Y. Only values for the Ochiai similarity index equal or greater than 0.3 are included. 'Pp' stands for amino acid position in peptide and 'Paa' for the amino acid occupying that position.