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Type I error rates of meta-analysis with five studies for different allele frequencies in the two subpopulations.
| Frequency | 10−5 | 10−6 | ||||
|---|---|---|---|---|---|---|
| Population 1 (2) | PCA | 1 GC | 2 GC | PCA | 1 GC | 2 GC |
| Ran(ran) | 9.89e–6 | 7.48e–6 | 8.13e–6 | 1.04e–6 | 6.30e–7 | 7.20e–7 |
| 0.4 (0.2) | 1.00e–5 | 0.418 | 0.426 | 9.90e–7 | 0.195 | 0.203 |
| 0.6 (0.2) | 1.01e–5 | 1.00 | 1.00 | 1.03e–6 | 0.999 | 1.00 |
| 0.8 (0.2) | 1.01e–5 | 1.00 | 1.00 | 9.78e–7 | 1.00 | 1.00 |
