Table 1.
Summary of the update of the coexpression data from versions 4.1 to 5.0
| Species | Abbreviation | Microarray platform (Affymetrix product ID) | Number of genes | Number of microarrays |
|
|---|---|---|---|---|---|
| ver. 5.0 | ver. 4.1 | ||||
| Homo sapiens | Hsa | HG-U133_Plus_2 | 19 803 | 73 083 (c4.0) | 4401 (c3.1) |
| Homo sapiens | Hsa2 | HuGene-1_0-st-v1 | 19 788 | 6865 (c1.0) | |
| Mus musculus | Mmu | Mouse430_2 | 20 403 | 31 479 (c3.0) | 2226 (c2.1) |
| Rattus norvegicus | Rno | Rat230_2 | 13 751 | 27 481 (c3.0) | 3526 (c2.0) |
| Gallus gallus | Gga | Chicken | 13 757 | 1024 (c2.0) | 352 (c1.0) |
| Danio rerio | Dre | Zebrafish | 10 112 | 1126 (c2.0) | 590 (c1.0) |
| Drosophila melanogaster | Dme | Drosophila_2 | 12 626 | 3336 (c2.0) | 1102 (c1.0) |
| Caenorhabditis elegans | Cel | Celegans | 17 256 | 1034 (c2.0) | 514 (c1.0) |
| Macaca mulatta | Mcc | Rhesus | 15 779 | 675 (c1.0) | |
| Canis lupus | Cfa | Canine_2 | 16 211 | 377 (c1.0) | |
| Saccharomyces cerevisiae | Sce | Yeast_2 | 4461 | 2693 (c1.0) | |
| Schizosaccharomyces pombe | Spo | Yeast_2 | 4881 | 111 (c1.0) | |
“c” is added for each coexpression version (e.g. c4.0) to prevent confusions with the COXPRESdb version as a whole (e.g. ver. 5.0).