Table 1.
Assemblies released on the Genome Browser in 2012
| Common name | Scientific name | UCSC ID | Sequencing center | Sequencing center ID | Notes |
|---|---|---|---|---|---|
| Chicken | Gallus gallus | galGal4 | Int’l Chicken GSC | Gallus_gallus-4.0 | |
| Cow | Bos Taurus | bosTau7 | Cattle GSC | Btau_4.6.1 | |
| Dog | Canis familiaris | canFam3 | Dog GSC | V3.1 | |
| Fugu | Takifugu rubripes | fr3 | Int’l Fugu GSC | FUGU5 | RefSeq Genes, 8-species mult. alignment |
| Gibbon | Nomascus leucogenys | nomLeu1 | Gibbon GSC | Nleu1.0 | |
| Gorilla | Gorilla gorilla gorilla | gorGor3 | Wellcome Trust Sanger Institute | gorGor3.1 | |
| Lesser hedgehog tenrec | Echinops telfairi | echTel1 | Broad Institute | EchTel1 | |
| Medium ground finch | Geospiza fortis | geoFor1 | Genome 10K Project and BGI | GeoFor_1.0 | |
| Microbat | Myotis lucifugus | myoLuc2 | Broad Institute | Myoluc2.0 | |
| Mouse | Mus musculus | mm10 | Mouse GRC | GRCm38 | RefSeq Genes, 60-species mult. alignment |
| Naked mole-rat | Heterocephalus glaber | hetGla1 | BGI | HetGla_1.0 | |
| Rat | Rattus | rn4 | Baylor Human GSC | RGSC_v3.4 | |
| Tammar wallaby | Macropus eugenii | macEug2 | Tammar Wallaby GSC | Meug_1.1 | |
| Tasmanian devil | Sarcophilus harrisii | sarHar1 | Wellcome Trust Sanger Institute | Devil_refv7.0 | |
| Turkey | Meleagris gallopavo | melGal1 | Turkey GSC | Turkey_2.01 | |
| Western clawed frog | Xenopus (Silurana) tropicalis | xenTro3 | US DOE JGI-PGF | V4.2 | |
| Western painted turtle | Chrysemys picta bellii | chrPic1 | Int’l Painted Turtle GSC | Chrysemys_picta_bellii-3.0.1 | |
| Worm | Caenorhabditis elegans | ce10 | WormBase | WS220 | RefSeq Genes, 7-species mult. alignment |
| Yeast | Saccharomyces cerevisiae | sacCer3 | Saccharomyces Genome Database (SGD) | SacCer_Apr2011 | Ensembl Genes, 7-species mult. alignment |