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False coverage by overextension
| Tool | Bait covered (bp) | Trap covered (bp) | FDR (%) | Fraction of trap hit (%) |
|---|---|---|---|---|
| nhmmer | 244 069 604 | 6 200 737 | 2.48 | 2.30 |
| cross_match | 244 161 363 | 7 704 614 | 3.06 | 2.85 |
| rmblastn | 244 351 772 | 8 483 688 | 3.36 | 3.14 |
‘Bait’ and ‘trap’ sequences were produced as described in Figure 1 and the text. Total size of this benchmark was 516.2 Mb, of which 246.1 Mb was bait and 270.1 Mb was trap. FDR is defined as Trap bases/(Bait bases + Trap bases).
