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. 2012 Dec 21;18(47):7093–7099. doi: 10.3748/wjg.v18.i47.7093

Table 1.

Primer sequences, polymerase chain reaction and denaturing high-performance liquid chromatography conditions for detection of gene polymorphisms

Gene Primer sequence PCR annealing temperature (°C) PCR product size (bp) DHPLC application type Oven temperature (°C)
IL-1B-31 F: AGAAGCTTCCACCAATACTC 60 240 Mutation 59
R: AGCACCTAGTTGTAAGGAAG
IL-1B-511 F: TGGCATTGATCTGGTTCATC 58.5 306 Mutation 60.5
R: GTTTAGGAATCTTCCCACTT
IL-1 RN F: CCCCTCGAGCAACATCC 59 270-442 VNTR 50.0
R: GGTCAGAAGGGCAGAGA

DHPLC: Denaturing high-performance liquid chromatography; VNTR: Variable number of identical tandem repeats; PCR: Polymerase chain reaction; IL: Interleukin.