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. 2012 Dec 28;7(12):e53401. doi: 10.1371/journal.pone.0053401

Table 1. Nucleotide frequencies of TSD and its flanking sequences of complete elements (n = 59) and solo-LTRs (n = 112) of PbTRIM family.

Position −5 −4 −3 −2 −1 T1 T2 T3 T4 +1 +2 +3 +4 +5
A 63 45 84 78 79 96 37 117 17 57 62 78 59 68
C 13 32 5 23 18 25 4 4 26 13 10 4 30 18
G 15 30 3 9 14 35 3 8 19 21 22 4 34 14
T 80 64 79 61 60 15 127 42 109 80 77 85 48 71

Note: T1 and T4 represent the 4 nucleotides of the TSD. The negative (−) and positive (+) signs respectively denote the upstream and downstream position of the nucleotide from the 4-bp TSD region.