Table 2.
Degree of CCRG compared with random genes
| mean of CCRG | mean of random genes | fold* | p value# | |
|---|---|---|---|---|
| BIND |
9.24444 |
3.65349 |
2.53031 |
0.002 |
| IntAct |
22.01515 |
7.31961 |
3.0077 |
<0.001 |
| MINT |
9.77358 |
5.26234 |
1.85727 |
0.021 |
| HPRD |
26.10526 |
7.71614 |
3.3832 |
<0.001 |
| BioGRID |
24.86486 |
7.03614 |
3.53388 |
<0.001 |
| OPHID | 43.71429 | 12.2352 | 3.57283 | <0.001 |
*fold is the result of mean degree of CCRG divided by that of random genes.
#1000 random gene sets was selected from network, each randomization kept the number of selected genes same as that of real genes. Then for CCRG, p value was calculated over 1000 randomization.