Table 2. Characteristics of the SOLiD-SAGE tags.
Total tags | Tags with NlaIII site | Tags after removal of those with >10 As | Plant mapped tags (% of potential mappable) | Fungal mapped tags (% of potential mappable) | |
S1139E- | |||||
Replicate 1 | 10,266,193 | 7,208,225 | 7,194,891 | 4,346,031 (60%) | NA |
Replicate 2 | 8,048,623 | 5,629,653 | 5,613,295 | 3,303,965 (59%) | NA |
Replicate 3 | 6,015,959 | 4,019,984 | 4,012,492 | 2,269,416 (56%) | NA |
S1139RC | |||||
Replicate 1 | 5,415,607 | 3,044,831 | 3,041,847 | 1,137,472 (37%) | 43,199 (1.4%) |
Replicate 2 | 6,165,530 | 4,031,091 | 4,025,153 | 2,160,008 (54%) | 112,294 (2.8%) |
Replicate 3 | 5,736,324 | 3,364,721 | 3,361,001 | 1,471,380 (44%) | 71,927 (2.1%) |