Table 1.
Summarizing some main characteristics for the genome sequence presented in this paper together with a representative set of other already sequenced Francisella genomes
| |
F. noatunensis subsp. Orientalis Toba04 |
F. philomiragia subsp. philomiragia ATCC 25017 |
F. tularensis subsp. novicida U112 |
F. tularensis subsp. medisisatica FSC 147 |
F.tularensis subsp. tularensis SCHU S4 |
F.tularensis subsp. holarctica OSU18 |
|---|---|---|---|---|---|---|
| Fish parasite | Free-living | Free-living | Mammalian parasite | Mammalian parasite | Mammalian parasite | |
|
Genome size(bp) |
1,847,202 |
2,045,775 |
1,910.031 |
1,893,886 |
1,892,775 |
1,895,727 |
|
GC content(%) |
32 |
32 |
32 |
32 |
32 |
32 |
|
ORFs |
2289 |
1966 |
1781 |
1750 |
1852 |
1932 |
|
Protein coding genes |
1595 |
1911 |
1719 |
1406 |
1604 |
1555 |
|
Structural RNAs |
39 |
48 |
48 |
47 |
48 |
49 |
|
IS elements |
0 |
8 |
29 |
85 |
78 |
116 |
|
Pathogenecity Island |
1 |
1 |
1 |
2 |
2 |
2 |
| Pseudogenes | 252 | 3 | 14 | 297 | 200 | 328 |