Table 3.
Relative numbers of transconjugants or P1 transductantsa | ||||||||
---|---|---|---|---|---|---|---|---|
KL548 | Hfr GY2200 | Hfr KL226d | ||||||
Strain number | Relevantgenotype | Relative viabilitya | (F′ Pro+) | (λ)c | (Thr+Leu+) | (Pro+) | P1 transductants (Leu+) | |
A | AM2077 | priB | 0.98 | 0.89 | 1.06 | 0.83 | 1.05 | 0.4 |
N4454 | ruvABC | 0.62 | 0.62 | 0.84 | 0.42 | 0.43 | 0.18 | |
AM2078 | priB ruvABC | 0.28 | 0.0017 | 0.72 | 0.026 | 0.034 | 0.011 | |
N7946 | priB ruvABC rus-2 | 0.76 | 1.07 | 1.33 | 0.56 | 0.46 | 0.23 | |
B | AM2089 | priB recG | 0.77 | 0.85 | 0.97 | 0.69 | 0.69 | 0.49 |
AM2142 | priB recB | 0.25 | 0.15 | 0.56 | 0.00088 | 0.0005 | 0.0042 | |
C | AM2096 | priB ruvABC recA | 0.48 | 0.59 | 0.84 | 0.000024 | 0.000023 | ND |
N7938 | priB ruvABC lexA3 | 0.46 | 0.58 | 0.76 | 0.09 | 0.15 | ND | |
N7940 | priB ruvABC sfiA | 0.29 | 0.006 | 0.70 | 0.05 | 0.016 | 0.0099 | |
N8035 | priB ruvABC recB | 0.25 | 0.00008 | 0.93 | 0.00027 | 0.00061 | ND | |
AM2097 | priB ruvABC recF | 0.57 | 0.64 | 0.87 | 0.37 | 0.37 | 0.14 | |
AM2133 | priB ruvABC recJ | 0.42 | 0.42 | 0.86 | 0.088 | 0.14 | 0.11 | |
AM2134 | priB ruvABC recQ | 0.51 | 0.55 | 0.65 | 0.08 | 0.10 | 0.08 | |
D | N7915 | priB ruvABC dnaC809,820 | 0.61 | 0.85 | 1.16 | 0.25 | 0.56 | 0.19 |
N7926 | priB ruvABC dnaC809,820 priC | 0.2 | 0.0028 | 0.93 | 0.036 | 0.29e | 0.008 | |
N7918 | priB dnaC809,820 priC | 0.85 | 0.99 | 1.30 | 0.35 | 1.56 | 0.35 | |
N7934 | ruvABC priC | 0.52 | 0.68 | 0.58 | 0.27 | 0.47 | 0.14 | |
E | N7964 | priB ruvABC rpoB[G1260D] | 1.32 | 0.70 | 0.72 | 0.17 | 0.16 | 0.17 |
N7948 | ruvABC rpoB[G1260D] | 1.41 | 1.06 | 0.47 | 0.26 | 0.28 | 0.24 |
Values for cell viability are based on the recipient cultures used in conjugational crosses. Those based on cultures of the same recipients used in P1 transductions are shown in Table S2. Although the culture conditions are not the same, the two estimates are generally very close.
Mating was for 30 (KL548), 40 (KL226) or 60 (GY2200) min and the transconjugant class selected is indicated. The phage P1 donor was W3110. Values for wild-type control strain AB1157 are set at 1. The actual values ± SE are shown in Table S2. Mutant strains were tested in parallel with AB1157 and the values shown are mean yields relative to AB1157 in each of three or more experiments. Numbers of experiments, control mutant strains and standard errors are provided in Table S2. ND, not determined.
λ plaque forming units arising from zygotic induction of the λ prophage transferred by the Hfr.
Very similar values were obtained using N7610 as the Hfr donor, a ΔpriB::dhfr derivative of Hfr KL226.
The Hfr transfers priC+ proximal to the selected marker, hence the increased recovery of recombinant relative to the cross with Hfr GY2200, which transfers priC+ distal to the selected marker such that fewer of the selected transconjugants receive this allele.