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. 2012 Dec 11;5:291. doi: 10.1186/1756-3305-5-291

Table 6.

Length and percent of nucleotide and aa homology of the 5’ end pre-repeat region between the orthologs of gp36 in Ehrlichia mineirensis (UFMG-EV) and related genes

 
 
Nucleotide
aa
Source Strain Length1 Homology2 Length3 Homology4
Ehrlichia mineirensis
(UFMG-EV)
422
-
141
-
Ehrlichia canis gp36
TWN1 [EF551366]
425
91.2
142
82
Louisiana [DQ146151]
428
88.2
143
78
Sao Paulo [DQ146154]
428
88.4
143
78
Cameroon [DQ146155]
428
88.6
143
79
Ehrlichia chaffeensis gp47
Arkansas [DQ085430]
471
61.8
157
52
Sapulpa [DQ085431]
461
62.1
154
53
Jax [DQ146156]
461
60.7
154
51
St Vincent [DQ146157]
461
62.1
154
53
Ehrlichia ruminantium mucin-like protein Highway [AF308673] 410 54.9 137 38

1 - The length were determinate using the Tandem Repeats Finder database [30].

2 - Percent of nucleotide homology were calculated with MegAlign, DNAStar, USA. Comparing with E. mineirensis (UFMG-EV).

3 - The length was determined using ClustalW [20] in comparison with Ehrlichia mineirensis (UFMG-EV).

4 - Percent of aa homology were calculated with ClustalW [20]. Comparing with E. mineirensis (UFMG-EV).

Accession Numbers are from GenBank.