Table 2.
Bacterial and fungal DNA used for the setting up of the 2qPCR assay
| Species | Strain and isolate references |
|---|---|
|
Bacillus anthracis |
CEB 9434 |
|
Bacillus cereus |
DSM 345 |
|
Enterococcus casseliflavus |
DSM 10255 |
|
Staphylococcus aureus |
ATCC 35884 |
|
Streptococcus oralis |
DSM 20627 |
|
Streptococcus pneumoniae |
ATCC 6314-D |
|
Streptococcus pyogenes |
ATCC 12344-D |
|
Acinetobacter calcoaceticus |
DSM 30006 |
|
Citrobacter freundii |
DSM 30039 |
|
Escherichia coli |
R453 |
|
Escherichia coli |
R456 |
|
Escherichia coli |
R457 |
|
Haemophilus influenzae |
DSM 4690 |
|
Klebsiella oxytoca |
ATCC 700324-D |
|
Klebsiella pneumoniae |
ATCC 700721-D |
|
Legionella pneumophila |
DSM 7513 |
|
Moraxella catarrhalis |
DSM 9143 |
|
Neisseria gonorrhoeae |
ATCC 53420-D |
|
Neisseria meningitidis |
DSM 10036 |
|
Providencia stuartii |
DSM 4539 |
|
Pseudomonas aeruginosa |
DSM 50063 |
|
Pseudomonas fluorescens |
DSM 50090 |
|
Pseudomonas syringae |
DSM 1241 |
|
Serratia marcescens |
DSM 30121 |
|
Stenotrophomonas maltophilia |
DSM 8573 |
|
Alternaria alternata |
CTMA 07-022 |
|
Aspergillus fumigatus |
CTMA 07-035 |
|
Botrytis cinerea |
CTMA BC/07/31 |
|
Cladosporium cladosporoides |
CTMA 07-019 |
|
Cladosporium herbarum |
CTMA CH/07/41 |
|
Epicoccum nigrum |
CTMA 07-086 |
|
Pleospora herbarum |
CTMA 07-077 |
| Trichophyton rubrum | CTMA MYC001 |
ATCC: American Type Culture Collection.
CEB: Centre d’Etude du Bouchet, Vert le Petit, France.
DSM: Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH.
CTMA: Center for Applied Molecular Technologies, private DNA sample collection.