Table 4.
Detected CNVs in a common deletion on Chromosome 8
| Method | #CN= 0 | #CN=1 | #CN=3 | #Families with Mendelian errors | Time (min.) |
|---|---|---|---|---|---|
| PennCNV |
125 |
39 |
102 |
35 |
0.19 |
| GFL-Individual |
123 |
97 |
0 |
20 |
0.21 |
| GFL-Pedigree |
123 |
137 |
0 |
15 |
0.09 |
| MSSCAN-Pedigree | 123 | 154 | 0 | 15 | 0.11 |
Across the various algorithms, subjects are assigned to one of 4 copy numbers. For each algorithm, we report the total numbers of CN≠2 identified, the total number of nuclear families with Mendelian errors, and the average computation time (in minutes) per sample for the analysis of Chromosome 8.