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. 2012 Nov 28;32(48):17391–17400. doi: 10.1523/JNEUROSCI.2438-12.2012

Table 1.

Sequence of nucleotides

Primers DNA sequences
qRT-PCR GnRH sense 5′ CCCTTTGACTTTCACATCC 3′
qRT-PCR GnRH antisense 5′ GGGTTCTGCCATTTGATCCAC 3′
qRT-PCR Otx2 sense 5′-GCAGAGGTCCTATCCCATGA-3′ (Larder and Mellon, 2009)
qRT-PCR Otx2 antisense 5′-CTGGGTGGAAAGAGAAGCTG-3′ (Larder and Mellon, 2009)
qRT-PCR 18S sense 5′-TGGTTGATCCTGCCAGTAG-3′
qRT-PCR 18S antisense 5′-CGACCAAAGGAACCATAACT- 3′
Otx-2 mutant sense 5′-GCGAGAATTACCGGCGCCAAAGAACTTTTTCG-3′
Otx-2 mutant antisense 5′-GCTTTTTCAAGAAACCGCGGCCATTAAGAGCG-3′
Otx-2 binding site at the KsRE (−3005/−3000 bp)
    Sense 5′-CAGAGCTGATGGAAACCACA-3′
    Antisense 5′-AGGAAACCACACCCAACAAG-3′
Otx-2 binding site at the nKsRE (−2418/−2413 bp)
    Sense 5′-GGCTTGATTATAGCCACCAGGAAAGG-3′
    Antisense 5′-GACATGCCACTCTCCTGA-3′
Otx-2 binding site at the NSE (−319/−252 bp)
    Sense 5′-TCCCTGTGAGTTTTTCAGTGTG-3′
    Antisense 5′-GCAGCACAGCCCATAGTCTT-3′
Negative control primers (−1858/−1567 bp)
    Sense 5-′TGAGATGAACAGCCCACAAA-3′
    Antisense 5′-TGCTCAGTCCTCATGACAGG-3′

Mutated sequences are underlined.