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. Author manuscript; available in PMC: 2014 Jan 2.
Published in final edited form as: Anal Chem. 2012 Dec 18;85(1):251–257. doi: 10.1021/ac3026459

Table 2.

Nucleic Acid Targets

Name Nucleic Acid Type Sequence
TS1 DNA (27bp) 5′ - GGA-TTA-TTG-TTA-AAT-ATT-GAT-AAG-GAT - 3′
TS2 DNA (27bp) 5′ - GGA-TTA-TTG-TTA-AAT-ATT-GAT-AAG-GAT - 3′
(ds) 3′ - CCT-AAT-AAC-AAT-TTA-TAA-CTA-TTC-CTA - 5′
TS3 DNA (50bp) (ds) 5′ - GCTGAAATATAGGATTATTGTTAAATATTGATAAGGATGTAATGATAATA - 3′
3′ - CGACT TTATATCCTAATAACAATTTATAACTATTCCTACATTACT ATTAT - 5′
TC mismatch DNA (27bp) 5′ - GGA-TTC-TTG-TTA-AAT-ATT-GAT-AAG-GAT - 3′
TG mismatch DNA (27bp) 5′ - GGA-TTG-TTG-TTA-AAT-ATT-GAT-AAG-GAT - 3′
TT mismatch DNA (27bp) 5′ - GGA-TTT-TTG-TTA-AAT-ATT-GAT-AAG-GAT - 3′
SS1 Control (24bp) 5′ - TGC-AGT-CTG-TTA-CAA-TGA-CCT-ACT - 3′

Abbreviations: bp: base pairs; ds: double-stranded. Underlined portions of sequences indicate target regions of PNA probes.