Table 2.
Concordance between the genotypic and phenotypic identification of 62 yeast isolates previously identified as Rhodotorula speciesa
| Isolate | Source | ITS sequencing |
ID32C system + nitrate assimilation |
||
|---|---|---|---|---|---|
| Yeast species | Accession no. | Yeast species | Identification code | ||
| 16 | Blood culture | R. mucilaginosa | JX499189 | R. mucilaginosa | 5461750113 |
| 17 | Blood culture | R. mucilaginosa | JX512667 | R. mucilaginosa | 5461750311 |
| 230* | Blood culture | R. dairenensis | JX512677 | R. mucilaginosa | 5061710113 |
| 281 | Blood culture | R. mucilaginosa | JX512680 | R. mucilaginosa | 5461750113 |
| 320 | Blood culture | R. mucilaginosa | JX512681 | R. mucilaginosa | 5461750111 |
| 369* | Blood culture | Rhodosporidium fluviale | JX512682 | R. glutinis | 5465750313 |
| 467 | Blood culture | R. mucilaginosa | JX512683 | R. mucilaginosa | 7461750111 |
| 701 | Blood culture | R. mucilaginosa | JX512684 | R. mucilaginosa | 5461750111 |
| 702 | Blood culture | R. mucilaginosa | JX512685 | R. mucilaginosa | 5461750113 |
| 717 | Blood culture | R. mucilaginosa | JX512686 | R. mucilaginosa | 5461750113 |
| 740 | Blood culture | R. mucilaginosa | JX512687 | R. mucilaginosa | 5461750111 |
| 755 | Blood culture | R. mucilaginosa | JX512688 | R. mucilaginosa | 5461750111 |
| 800 | Blood culture | R. mucilaginosa | JX512689 | R. mucilaginosa | 5461750111 |
| 803 | Blood culture | R. mucilaginosa | JX512690 | R. mucilaginosa | 5461750111 |
| 808 | Blood culture | R. mucilaginosa | JX512691 | R. mucilaginosa | 5461710113 |
| 1385 | Blood culture | R. mucilaginosa | JX512692 | R. mucilaginosa | 5461750111 |
| 1765 | Blood culture | R. mucilaginosa | JX512693 | R. mucilaginosa | 5461750111 |
| 2145* | Blood culture | R. minuta | JX512694 | Unacceptable profile | 5313514331 |
| 2265 | Blood culture | R. mucilaginosa | JX512695 | R. mucilaginosa | 5461750113 |
| 2334B | Blood culture | R. mucilaginosa | JX512696 | R. mucilaginosa | 5061550313 |
| 2413 | Blood culture | R. mucilaginosa | JX512697 | R. mucilaginosa | 5461750111 |
| 2495 | Blood culture | R. mucilaginosa | JX512698 | R. mucilaginosa | 5461650111 |
| 2552 | Blood culture | R. mucilaginosa | JX512699 | R. mucilaginosa | 5061350113 |
| 2595 | Blood culture | R. mucilaginosa | JX512700 | R. mucilaginosa | 5461750111 |
| 2675 | Blood culture | R. mucilaginosa | JX512701 | R. mucilaginosa | 5461750113 |
| 2708 | Blood culture | R. mucilaginosa | JX512702 | R. mucilaginosa | 5461750113 |
| 2795 | Blood culture | R. minuta | JX512703 | R. minuta | 4513314331 |
| 2843A | Blood culture | R. mucilaginosa | JX512704 | R. mucilaginosa | 7461360113 |
| 2945* | Blood culture | R. dairenensis | JX512705 | R. mucilaginosa | 5421710013 |
| 2984 | Blood culture | R. mucilaginosa | JX512706 | R. mucilaginosa | 5461750111 |
| 2988 | Blood culture | R. mucilaginosa | JX512707 | R. mucilaginosa | 5461750113 |
| 2991B | Blood culture | R. mucilaginosa | JX512708 | R. mucilaginosa | 5461750113 |
| 3020 | Blood culture | R. mucilaginosa | JX512709 | R. mucilaginosa | 5461750113 |
| 3051 | Blood culture | R. mucilaginosa | JX512710 | R. mucilaginosa | 5021610003 |
| 3166 | Blood culture | R. mucilaginosa | JX512711 | R. mucilaginosa | 5461750113 |
| 3201 | Blood culture | R. mucilaginosa | JX512712 | R. mucilaginosa | 5461750113 |
| 3225 | Blood culture | R. mucilaginosa | JX512713 | R. mucilaginosa | 5461750113 |
| 6190 | Blood culture | R. mucilaginosa | JX512714 | R. mucilaginosa | 5461750113 |
| 6437 | Blood culture | R. mucilaginosa | JX512715 | R. mucilaginosa | 5461750113 |
| 04B | Secretion from a fistula hand | R. mucilaginosa | JX499188 | R. mucilaginosa | 5061750113 |
| 130 | Bronchoalveolar lavage | R. mucilaginosa | JX512668 | R. mucilaginosa | 5461750113 |
| 131 | Bronchoalveolar lavage | R. mucilaginosa | JX512669 | R. mucilaginosa | 5461750111 |
| 132A | Bronchoalveolar lavage | R. mucilaginosa | JX512670 | R. mucilaginosa | 5461750113 |
| 150 | Scalp | R. glutinis | JX512671 | R. glutinis | 7067750113 |
| 157 | Sole of the foot | R. glutinis | JX512672 | R. glutinis | 7067750113 |
| 214 | Nasal mucus | R. mucilaginosa | JX512673 | R. mucilaginosa | 5441750113 |
| 215 | Pleural fluid | R. mucilaginosa | JX512674 | R. mucilaginosa | 5461750113 |
| 216 | Pleural fluid | R. mucilaginosa | JX512675 | R. mucilaginosa | 5461750113 |
| 221 | Pleural fluid | R. mucilaginosa | JX512676 | R. mucilaginosa | 5461750113 |
| 258 | Skin biopsy | R. mucilaginosa | JX512678 | R. mucilaginosa | 5061750113 |
| 279 | Catheter | R. mucilaginosa | JX512679 | R. mucilaginosa | 5461640101 |
| 9amb | Env. | R. mucilaginosa | JX272795 | R. mucilaginosa | 5461750113 |
| 10amb | Env. | R. mucilaginosa | JX272796 | R. mucilaginosa | 5461750111 |
| 11amb | Env. | R. mucilaginosa | JX494370 | R. mucilaginosa | 5461750113 |
| 14amb | Env. | R. mucilaginosa | JX494371 | R. mucilaginosa | 5061750113 |
| 3560 | Env. | R. mucilaginosa | JX494373 | R. mucilaginosa | 5461750113 |
| 3630* | Env. | R. slooffiae | JX494375 | R. minuta | 4513214311 |
| 3988A | Env. | R. mucilaginosa | JX494374 | R. mucilaginosa | 7061750113 |
| 15amb | Env. | R. mucilaginosa | JX494372 | R. mucilaginosa | 5461750113 |
| CBS 20 | CBS | R. glutinis | R. glutinis | 5061310013 | |
| CBS 320* | CBS | R. pallida | Rhodotorula sp. | 7067350113 | |
| CBS 329 | CBS | R. mucilaginosa | R. mucilaginosa | 5661750311 | |
a
Isolates that showed differences between the phenotypic and genotypic identifications are marked with an asterisk. The identification codes in bold represent the two most common biochemical profiles among all R. mucilaginosa isolates tested. Env., air from hospital environment; CBS, reference strains.