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. 2013 Jan;79(1):347–356. doi: 10.1128/AEM.02667-12

Table 1.

mRNA folding energies of the AGGAGG ribosome binding site and activities of secreted nuclease and α-amylase of selected clones from the Usp45sp silent mutation librarya

Usp45sp silent mutation clone ΔG of ribosome binding site (AGGAGG) Secreted nuclease activity (compared to Usp45sp)b Secreted α-amylase activity (% of Usp45sp)c
Usp45SM2 −8.4 79 ± 5††
Usp45SM14 −8.4 −− 83 ± 13
Usp45SM11 −6.1 −− 85 ± 3††
Usp45sp −6.1 * 100
Usp45SM16 −5.9 91 ± 12
Usp45SM19 −5.9 + 106 ± 16
Usp45SM4 −5.7 + 107 ± 6
Usp45SM10 −3.8 + 116 ± 5
Usp45SM20 −3.7 ++ 103 ± 15
Usp45SM5 −3.7 + 113 ± 5
Usp45SM8 −3.3 + 92 ± 5
Usp45SM15 −3.3 + 100 ± 6
Usp45SM9 −3.3 + 114 ± 7
Usp45SM7 −3.2 + 105 ± 14
Usp45SM6 −2.5 ++ 99 ± 12
Usp45SM12 −1.6 ++ 96 ± 12
Usp45SM3 −0.6 * 114 ± 3††
a

Nuclease and α-amylase secretion levels are reported for cultures induced with 10 ng/ml nisin for 2 h at mid-log phase. ΔG, mRNA folding energy. Nucleotide sequences are given in Table S4 in the supplemental material.

b

Data represent levels of nuclease secretion. *, secretion similar to Usp45sp level; −, secretion slightly (<10%) lower than Usp45sp level; −−, secretion much (>10%) lower than Usp45sp level; +, secretion slightly (<10%) higher than Usp45sp level; ++, secretion much (>10%) higher than Usp45sp level.

c

α-Amylase secretion data represent the means ± standard errors of the means (SEM) of the results of three independent experiments. †, P < 0.05; ††, P < 0.01 (for statistical comparison of α-amylase activities of the respective clone and Usp45sp using one-tailed Student's t test).