Table 1.
Sequences of oligonucleotides used for amplification of target genes
Gene (protein)a | Primer (sequence) |
---|---|
Cbei_R0001 (16S rRNA) | 16S-F (5′-GAAGAATACCAGTGGCGAAGGC-3′) |
16S-R (5′-ATTCATCGTTTACGGCGTGGAC-3′) | |
Cbei_2110 (ArsA) | ArsA-F (5′-GGGCTTGAAAACGTAAGAGC-3′) |
ArsA-R (5′-CTCCGCCTTTACCCATTGTA-3′) | |
Cbei_1273 (hypothetical protein) | hp1-F (5′-ATTAGAGCAGGCGTTTTGGA-3′) |
hp2-R (5′-AACCTTCTTTCAGCCGCATA-3′) | |
Cbei_0476 (hypothetical protein) | hp2-F (5′-GCAAGCAGGCTTCTAGCATT-3′) |
hp2-R (5′-CAGAAATGCAAATTGCTCCA-3′) | |
Cbei_0422 (SpoIID) | spoIID-F (5′-TGATACAATTACTGCCAAG-3′) |
spoIID-R (5′-GTTTTTCCAGAGCTGGTTGC-3′) | |
Cbei_2146 (PdaA) | pdaA-F (5′-CATGAGAAGGATTGGCATCA-3′) |
pdaA-R (5′-TGGTAAAGCCTTCGCTGTTT-3′) | |
Cbei_0830 (DnaK) | dnak-F (5′-ACTAAGGATGCAGGTAAG-3′) |
dnaK-R (5′-CACCACCTAAGTCATAAA-3′) | |
Cbei_1049 (ESBP) | espb-F (5′-TTGGGAGTAAGCTTGGTTGC-3′) |
esbp-R (5′-TGGAACTATTTCCCCGTTCTC-3′) | |
Cbei_0829 (GrpE) | grpE-F (5′-GCTGTTGCAGCTGATGGTAG-3′) |
grpE-R (5′-CCCTTTTGGAAAACTTCTGC-3′) | |
Cbei_2831 (CBP) | cbp-F (5′-GCAGCAACAACAAAAGCAGA-3′) |
cbp-R (5′-GGGTTATATGGTGCTGTTCC-3′) |
ESBP, extracellular solute-binding protein.