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. 2013 Jan;195(1):135–144. doi: 10.1128/JB.01477-12

Table 2.

Bacterial strains and plasmids used in this studya

Strain or plasmid Relevant genotype/propertyb Source or reference
Strains
    TY05 K-12 MG1655 fadD::Ptrc-BTE fadE::Ptrc-BTE fadAB::Ptrc-BTE 34
    TY06 K-12 MG1655 fadD::Ptrc-BTE-H204A fadE::Ptrc-BTE-H204A fadAB::Ptrc-BTE-H204A 34
    TY05ara K-12 MG1655 fadD::Ptrc-BTE fadE::Ptrc-BTE fadAB::Ptrc-BTE ΔaraFGH Φ(ΔaraEp PCP18-araE) ΔaraBAD This work
    BW25113 lacIq rrnB3 F Δ(araD-araB)567 ΔlacZ4787(::rrnB-3) λ rph-1 Δ(rhaD-rhaB)568 hsdR514 36
    JW5249-1 BW25113 ΔmarA752::kan 36
    JW4359-1 BW25113 Δrob721::kan 36
    JW4023-5 BW25113 ΔsoxS756::kan 36
    JW5503-1 BW25113 ΔtolC732::kan 36
    JW2341-1 BW25113 ΔfadL752::kan 36
    JW1819-1 BW25113 Δprc755::kan 36
    JW2454-1 BW25113 ΔacrD790::kan 36
    JW1040-1 BW25113 ΔmdtG723::kan 36
    JW1655-1 BW25113 ΔmdtK740::kan 36
    JW0826-1 BW25113 Δcmr742::kan 36
    JW0912-1 BW25113 ΔompF746::kan 36
    DY330 K-12 W3110 ΔlacU169 gal490 pglΔ8 λ cI857 Δ(cro-bioA) (Tetr) 39
Plasmids
    pBAD33 PBAD promoter, pACYC origin, Cmr 44
    pBAD33* pBAD33 with araC-C280* mutation 45
    pBAD33*-acrAB pBAD33* carrying acrAB under PBAD control This work
    pBAD33*-mdtEF pBAD33* carrying mdtEF under PBAD control This work
    pBAD33*-mdtEF-tolC pBAD33* carrying mdtEF-tolC artificial operon under PBAD control This work
    pBAD33*-emrAB pBAD33* carrying emrAB under PBAD control This work
    pBAD33*-mdtABCD pBAD33* carrying mdtABCD under PBAD control This work
    pKD13 Template plasmid, R6K gamma origin, Ampr Kanr 38
    pCP20 Carries yeast FLP recombinase under constitutive promoter control, pSC101 origin, λ cI857+, λ pR Rep(Ts), Ampr Cmr 41
a

For the full strain and plasmid list, see Table S2 in the supplemental material.

b

Abbreviations: Tetr, tetracycline resistance; Ampr, ampicillin resistance; Cmr, chloramphenicol resistance; Kanr, kanamycin resistance; Ts, temperature sensitive.