Table 1.

AtGenExpress Experimental Series

GSE Accession Number	Number of Samples	Experiment Description	Sampled Tissue
GSE5615	42	Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors	Leaf
GSE5616	18	Response to Phytophthorainfestans	Leaf
GSE5617	48	Light treatments	Shoot
GSE5620	36	Stress Treatments (Control plants)	Root and shoot
GSE5621	24	Stress Treatments (Cold stress)	Root and shoot
GSE5622	24	Stress Treatments (Osmotic stress)	Root and shoot
GSE5623	24	Stress Treatments (Salt stress)	Root and shoot
GSE5624	28	Stress Treatments (Drought stress)	Root and shoot
GSE5625	24	Stress Treatments (Genotoxic stress)	Root and shoot
GSE5626	28	Stress Treatments (UV-B stress)	Root and shoot
GSE5627	28	Stress Treatments (Wounding stress)	Root and shoot
GSE5628	32	Stress Treatments (Heat stress)	Root and shoot
GSE5629	24	Developmental series (seedlings and whole plants)	Shoot and whole plant
GSE5630	60	Developmental series (leaves)	Leaf (different stages)
GSE5631	21	Developmental series (roots)	Root (different stages)
GSE5632	66	Developmental series (flowers and pollen)	Flower (different stages)
GSE5633	42	Developmental series (shoots and stems)	Shoots and stems (different stages)
GSE5634	24	Developmental series (siliques and seeds)	Siliques and seeds (different stages)
GSE5684	12	Pathogen Series: Response to Botrytis cinerea infection	Mature leaf
GSE5685	32	Pathogen Series: Pseudomonas half leaf injection	Stage 10–11 rosette leaf
GSE5686	48	Pathogen Series: Response to Erysipheorontii infection	Mature leaf
GSE5687	4	Different temperature treatment of seeds	Seed
GSE5688	22	Response to sulfate limitation	Root
GSE5696	26	Effect of brassinosteroids in seedlings	Whole plant
GSE5697	8	Comparison of plant hormone-related mutants	Whole plant
GSE5698	12	Cytokinin treatment of seedlings	Whole plant
GSE5699	6	ARR21C overexpression	Whole plant
GSE700	8	Effect of ABA during seed imbibition	Seed
GSE701	12	Basic hormone treatment of seeds	Seed