Table 1.
Assembly statistics
Number | Bases (Mb) | N50L (bp)a | N50 (n)b | MLc (bp) | |
---|---|---|---|---|---|
Newbler | |||||
Contigsd | 284,239 | 536 | 2,778 | 50,237 | 76,504 |
Scaffolds | 6,467 | 611 | 687,709 | 218 | 4,999,318 |
Entire assemblye | 157,887 | 753 | 459,495 | 344 | 4,999,318 |
Celera | |||||
Contigsd | 135,024 | 555 | 7,128 | 19,938 | 117,463 |
Scaffolds | 3,832 | 608 | 488,312 | 373 | 2,810,583 |
Entire assemblye | 17,039 | 629 | 469,840 | 395 | 2,810,583 |
Minimum sequence length in which half of the assembled bases occur.
Number of sequences with N50L or longer.
Maximum Length.
Contigs greater than 500bp.
Scaffolds and unplaced contigs.